RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 COL1A2P08123 1366 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 ACSL4O60488 711 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 SMIM10L2AP0DMW4 78 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 SMIM10L2BP0DMW5 78 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 MBL2P11226 248 aaPredicted RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 MMP8P22894 467 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 CBX5P45973 191 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 HLCSP50747 726 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 MERTKQ12866 999 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 MAP2K5Q13163 448 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 ATP13A4Q4VNC1 1196 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 FASTKD1Q53R41 847 aaKnown RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 ZNF667Q5HYK9 610 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 LIN9Q5TKA1 542 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 DENND1BQ6P3S1 775 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 CCBE1Q6UXH8 406 aaPredicted RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 SLCO6A1Q86UG4 719 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 OFCC1Q8IZS5 231 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 PGAM4Q8N0Y7 254 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 SCML4Q8N228 414 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 NAT8LQ8N9F0 302 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 GDF15Q99988 308 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 ACAT2Q9BWD1 397 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 SLA2Q9H6Q3 261 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 WASH6PQ9NQA3 447 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 FBXO8Q9NRD0 319 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 CYTH4Q9UIA0 394 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 C9IYK1 514 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 AXIN1O15169 862 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 PHGDHO43175 533 aaKnown RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 SCO1O75880 301 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 PRLP01236 227 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 ZNF865P0CJ78 1059 aaPredicted RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 HOXD8P13378 290 aaPredicted RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 ENO3P13929 434 aaPredicted RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 RBL1P28749 1068 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 POU5F1BQ06416 359 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 PAGE2BQ5JRK9 111 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 DESI1Q6ICB0 168 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 DRICH1Q6PGQ1 229 aaPredicted RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 LYSMD2Q8IV50 215 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 TMEM151BQ8IW70 566 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 ANKFN1Q8N957 763 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 GRPEL2Q8TAA5 225 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 ACSF2Q96CM8 615 aaPredicted RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 RCN3Q96D15 328 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 HEXIM2Q96MH2 286 aaKnown RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 MCEEQ96PE7 176 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 TM9SF2Q99805 663 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 MCOLN1Q9GZU1 580 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 TIGARQ9NQ88 270 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 SRRDQ9UH36 339 aa11.88□□□□□ -0.51
RTN3-203ENST00000341307 CNOT6Q9ULM6 557 aaKnown RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 NOSIPQ9Y314 301 aaKnown RBP11.88□□□□□ -0.51
RTN3-203ENST00000341307 FAM25EA8MYX2 175 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 RAD51BO15315 384 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 TMEM63AO94886 807 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 PROSCO94903 275 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 DLGAP3O95886 979 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 CCNCP24863 283 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 HOXA11P31270 313 aaPredicted RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 HTR2BP41595 481 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 PLA2G16P53816 162 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 MAP3K7CLP57077 242 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 GJA9P57773 515 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 OGDHQ02218 1023 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 ZNF252P-AS1Q0IIN9 211 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 TARDBPQ13148 414 aaKnown RBP eCLIP11.87□□□□□ -0.51
RTN3-203ENST00000341307 BMPR2Q13873 1038 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 GLRA4Q5JXX5 417 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 SDE2Q6IQ49 451 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 LINC00299Q6ZSB3 139 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 TFAP2DQ7Z6R9 452 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 APPL2Q8NEU8 664 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 TTLQ8NG68 377 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 FAM110BQ8TC76 370 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 PIK3R3Q92569 461 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 SH3KBP1Q96B97 665 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 BTN2A3PQ96KV6 586 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 KCNN2Q9H2S1 579 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 ADAMTS10Q9H324 1103 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 WDR41Q9HAD4 459 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 PCDH9Q9HC56 1237 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 C20orf96Q9NUD7 363 aaPredicted RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 ARPC4-TTLL3A0A0A6YYG9 625 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 OR5K4A6NMS3 321 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 SYNCRIPO60506 623 aaKnown RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 UGT2B11O75310 529 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 IFNB1P01574 187 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 NTRK1P04629 796 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 SNRPAP09012 282 aaKnown RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 RPL10AP62906 217 aaKnown RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 RHDQ02161 417 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 BST2Q10589 180 aaKnown RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 TMEM132DQ14C87 1099 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 YIF1BQ5BJH7 314 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 BRMS1LQ5PSV4 323 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 CATSPEREQ5SY80 951 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms