RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 PTERQ96BW5 349 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 ABI2Q9NYB9 513 aaPredicted RBP12.65□□□□□ -0.38
BRPF3-201ENST00000339717 UGT2A1Q9Y4X1 527 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 NPHP4O75161 1426 aaPredicted RBP12.65□□□□□ -0.38
BRPF3-201ENST00000339717 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 TRAV20A0A0B4J274 112 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 MBL2P11226 248 aaPredicted RBP12.65□□□□□ -0.38
BRPF3-201ENST00000339717 COL6A2P12110 1019 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 CTRB1P17538 263 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 HTR2AP28223 471 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 IL6STP40189 918 aaPredicted RBP12.65□□□□□ -0.38
BRPF3-201ENST00000339717 ARFIP1P53367 373 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 ERVK-25P63136 954 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 CHAF1BQ13112 559 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 OXA1LQ15070 435 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 ASPRV1Q53RT3 343 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 CTRB2Q6GPI1 263 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 ZDHHC24Q6UX98 284 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 RDH11Q8TC12 318 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 IGDCC4Q8TDY8 1250 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 ZNF669Q96BR6 464 aaPredicted RBP12.65□□□□□ -0.38
BRPF3-201ENST00000339717 ERVK-6Q9BXR3 956 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 ITPAQ9BY32 194 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 LIN7BQ9HAP6 207 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 ERVK-18Q9QC07 812 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 MAU2Q9Y6X3 613 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 ATP13A4Q4VNC1 1196 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 CFAP206Q8IYR0 622 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 CADM3Q8N126 398 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 FIBCD1Q8N539 461 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 BANPQ8N9N5 519 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 STRBPQ96SI9 672 aaKnown RBP12.65□□□□□ -0.38
BRPF3-201ENST00000339717 KCNS3Q9BQ31 491 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 IER2Q9BTL4 223 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 NMRAL1Q9HBL8 299 aa12.65□□□□□ -0.38
BRPF3-201ENST00000339717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■■■■□ 21.9
BRPF3-201ENST00000339717 C9IYK1 514 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 LRIG2O94898 1065 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 ALDH3A2P51648 485 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 ERVFC1P60507 584 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 RHDQ02161 417 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 MPP2Q14168 576 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 SURF1Q15526 300 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 VMACQ2NL98 169 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 RAB11FIP2Q7L804 512 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 SLC34A3Q8N130 599 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 NPAS2Q99743 824 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 FOLH1BQ9HBA9 442 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 POLG2Q9UHN1 485 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 ATP7BP35670 1465 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 CHD1O14646 1710 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 ATP8B3O60423 1300 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 H0YAE9 185 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 DLGAP1O14490 977 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 NDST3O95803 873 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 C9P02748 559 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 CKMT2P17540 419 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 TMIGD2Q96BF3 282 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 MAP6Q96JE9 813 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 CPNE1Q99829 537 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 CYP3A43Q9HB55 503 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 CCNL1Q9UK58 526 aaPredicted RBP12.64□□□□□ -0.39
BRPF3-201ENST00000339717 STX16-NPEPL1H3BU86 382 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 CFBP00751 764 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 CYP1A2P05177 515 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 DDCP20711 480 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 SDC4P31431 198 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 XKR9Q5GH70 373 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 EPHX4Q8IUS5 362 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 DNAJC10Q8IXB1 793 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 UBQLNLQ8IYU4 475 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 CPA5Q8WXQ8 436 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 LRRC4CQ9HCJ2 640 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 NIT2Q9NQR4 276 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 PNPOQ9NVS9 261 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 PTTG3PQ9NZH4 202 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 LEF1Q9UJU2 399 aaPredicted RBP12.64□□□□□ -0.39
BRPF3-201ENST00000339717 HRH3Q9Y5N1 445 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 ALG5Q9Y673 324 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 U3KQV3 271 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 MYOCOSA0A1B0GUC4 107 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 EI24O14681 340 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 MID1O15344 667 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 PTGIRP43119 386 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 MCAMP43121 646 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 ANTXR2P58335 489 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 ERVK-21P61565 698 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 CDO1Q16878 200 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 NDUFAF5Q5TEU4 345 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 GJB7Q6PEY0 223 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 STOML3Q8TAV4 291 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 SDR42E1Q8WUS8 393 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 AGAP2Q99490 1192 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 NEURL2Q9BR09 285 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 ZNF225Q9UK10 706 aa12.64□□□□□ -0.39
BRPF3-201ENST00000339717 INMT-MINDY4F8WBC2 141 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 EIF3DO15371 548 aaKnown RBP eCLIP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 KHDRBS3O75525 346 aaKnown RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 GLRA2P23416 452 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms