RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 GMNNO75496 209 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NTRK1P04629 796 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NUDT1P36639 197 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 MAGEA12P43365 314 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 GP2P55259 537 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 YBX1P67809 324 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NOMO3P69849 1222 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 PRAMEP78395 509 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 PRKCEQ02156 737 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SLC25A11Q02978 314 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NIPAL4Q0D2K0 466 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NEDD8Q15843 81 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 HIST2H2ACQ16777 129 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ZFYVE27Q5T4F4 411 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 METTL7BQ6UX53 244 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 FKBP9P1Q75LS8 142 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 OFCC1Q8IZS5 231 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 CBR4Q8N4T8 237 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 DTX3Q8N9I9 347 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 PIK3C3Q8NEB9 887 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 BPIFB6Q8NFQ5 453 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 LILRB1Q8NHL6 650 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ACTL9Q8TC94 416 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 VPS35Q96QK1 796 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 TARS2Q9BW92 718 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SLIRPQ9GZT3 109 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SYTL2Q9HCH5 934 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 HMG20AQ9NP66 347 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 PKD2L2Q9NZM6 624 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 IFT80Q9P2H3 777 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 COPG2Q9UBF2 871 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ANGPTL3Q9Y5C1 460 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SNX13Q9Y5W8 968 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ZW10O43264 779 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 TIPRLO75663 272 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 TOM1L1O75674 476 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 RASAL1O95294 804 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 ACO1P21399 889 aaKnown RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 DNAJB1P25685 340 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 MAP4P27816 1152 aaKnown RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 GARSP41250 739 aaKnown RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 NDST1P52848 882 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 TSPY1Q01534 308 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 BST2Q10589 180 aaKnown RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 TRAP1Q12931 704 aaKnown RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 EIF2B5Q13144 721 aaKnown RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 ZBTB6Q15916 424 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 ADPRMQ3LIE5 342 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 ATAD3CQ5T2N8 411 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 CCNJQ5T5M9 372 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 N4BP2L1Q5TBK1 243 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 KIAA1841Q6NSI8 718 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 PRR23BQ6ZRT6 265 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 ZBTB49Q6ZSB9 765 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 PHF13Q86YI8 300 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 KIAA0319LQ8IZA0 1049 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 NLGN4XQ8N0W4 816 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 SPARTQ8N0X7 666 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 PDIK1LQ8N165 341 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 SCML4Q8N228 414 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 PELI3Q8N2H9 469 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 SNX31Q8N9S9 440 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 PNPT1Q8TCS8 783 aaKnown RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 DYNC2LI1Q8TCX1 351 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 FIG4Q92562 907 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 EIF2AK1Q9BQI3 630 aaKnown RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 EFHD1Q9BUP0 239 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 YTHDF1Q9BYJ9 559 aaKnown RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 WDR55Q9H6Y2 383 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 CD320Q9NPF0 282 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 CYP26B1Q9NR63 512 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 TXNDC16Q9P2K2 825 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 PLXNB3Q9ULL4 1909 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 LRRIQ4A6NIV6 560 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 ABCB7O75027 752 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 KRT37O76014 449 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 RALBP11234 206 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 GSTM2P28161 218 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 ELK4P28324 431 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 NAMPTP43490 491 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 MLLT6P55198 1093 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 TRIM60Q495X7 471 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 TMEM198Q66K66 360 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 C15orf39Q6ZRI6 1047 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 STXBP4Q6ZWJ1 553 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 ACMSDQ8TDX5 336 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 MUL1Q969V5 352 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 VPS33AQ96AX1 596 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 MOCOSQ96EN8 888 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 TOE1Q96GM8 510 aaKnown RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 SIGLEC10Q96LC7 697 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 DACH2Q96NX9 599 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 NPAS2Q99743 824 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 SOX17Q9H6I2 414 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-202ENST00000339438 FBXL12Q9NXK8 326 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 TMEM216Q9P0N5 145 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 TMEM181Q9P2C4 612 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 GOLGA8QA0A0J9YX86 632 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 GOLGA8OA6NCC3 632 aa5.6□□□□□ -1.51
CSDE1-202ENST00000339438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms