RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 E7ENX8 843 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 TK2O00142 265 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 PITPNM1O00562 1244 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 SOAT2O75908 522 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 SBK3P0C264 359 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 COL6A1P12109 1028 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 CYP2C18P33260 490 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 ABCG1P45844 678 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 ZNF829Q3KNS6 432 aaPredicted RBP18.83■□□□□ 0.6
PSPC1-201ENST00000338910 CTXN3Q4LDR2 81 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 CERCAMQ5T4B2 595 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 KCTD11Q693B1 232 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 SEPT8Q92599 483 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 BORCS5Q969J3 196 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 ELAC1Q9H777 363 aaKnown RBP18.83■□□□□ 0.6
PSPC1-201ENST00000338910 BFARQ9NZS9 450 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 MPP6Q9NZW5 540 aa18.83■□□□□ 0.6
PSPC1-201ENST00000338910 PTBP2Q9UKA9 531 aaKnown RBP18.83■□□□□ 0.6
PSPC1-201ENST00000338910 TMX2-CTNND1H3BSU7 103 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 TRIM24O15164 1050 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 FOXD2O60548 495 aaPredicted RBP18.82■□□□□ 0.6
PSPC1-201ENST00000338910 PBX3P40426 434 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 CCL23P55773 120 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 BTG3Q14201 252 aaPredicted RBP18.82■□□□□ 0.6
PSPC1-201ENST00000338910 PPP4R4Q6NUP7 873 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 LYSMD3Q7Z3D4 306 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 LSMEM2Q8N112 164 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 PCDH20Q8N6Y1 951 aaKnown RBP18.82■□□□□ 0.6
PSPC1-201ENST00000338910 RDH11Q8TC12 318 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 GPR62Q9BZJ7 368 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 NOL11Q9H8H0 719 aaKnown RBP18.82■□□□□ 0.6
PSPC1-201ENST00000338910 MRPL40Q9NQ50 206 aaKnown RBP18.82■□□□□ 0.6
PSPC1-201ENST00000338910 KCNU1A8MYU2 1149 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 ATE1O95260 518 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 APOA4P06727 396 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 COL6A2P12110 1019 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 PSMD7P51665 324 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 NAGLUP54802 743 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 NFE2Q16621 373 aaPredicted RBP18.82■□□□□ 0.6
PSPC1-201ENST00000338910 DCDC5Q6ZRR9 648 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 ZBTB49Q6ZSB9 765 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 CPNE9Q8IYJ1 553 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 ACVR1CQ8NER5 493 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 LPGAT1Q92604 370 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 VAT1Q99536 393 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 LRFN2Q9ULH4 789 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 SLC27A5Q9Y2P5 690 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 SCN5AQ14524 2016 aa18.82■□□□□ 0.6
PSPC1-201ENST00000338910 FUOMA2VDF0 154 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 TRIM64A6NGJ6 449 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 NT5C1B-RDH14C9J2C7 533 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 ZNF189O75820 626 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-201ENST00000338910 ZNF12P17014 697 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 CKMT2P17540 419 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 PRKAA2P54646 552 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 OXCT1P55809 520 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 TRAP1Q12931 704 aaKnown RBP18.81■□□□□ 0.6
PSPC1-201ENST00000338910 GRAMD4Q6IC98 578 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 GK5Q6ZS86 529 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 CHSY3Q70JA7 882 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 C14orf80Q86SX3 495 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 MON1AQ86VX9 555 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 ARHGAP12Q8IWW6 846 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 SPATA22Q8NHS9 363 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 DPF3Q92784 378 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 ZNF669Q96BR6 464 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-201ENST00000338910 SLC39A8Q9C0K1 460 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 PAIP1Q9H074 479 aaKnown RBP18.81■□□□□ 0.6
PSPC1-201ENST00000338910 LRRC40Q9H9A6 602 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 CASS4Q9NQ75 786 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 CNOT6Q9ULM6 557 aaKnown RBP18.81■□□□□ 0.6
PSPC1-201ENST00000338910 COQ6Q9Y2Z9 468 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 VWA8A3KMH1 1905 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 ALDH2P05091 517 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 INHBBP09529 407 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 CSRP3P50461 194 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 ATPAF2Q8N5M1 289 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 ANKFN1Q8N957 763 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.81■□□□□ 0.6
PSPC1-201ENST00000338910 MFSD3Q96ES6 412 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 DOK1Q99704 481 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 SEZ6LQ9BYH1 1024 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 CHRAC1Q9NRG0 131 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 SARDHQ9UL12 918 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 SCML2Q9UQR0 700 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 PCDHB5Q9Y5E4 795 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 HS3ST4Q9Y661 456 aa18.81■□□□□ 0.6
PSPC1-201ENST00000338910 ZCWPW2A0A1B0GU75 182 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.8■□□□□ 0.6
PSPC1-201ENST00000338910 PRORSD1PA6NEY8 169 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 SOCS2O14508 198 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 CCL5P13501 91 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 TMEM135Q86UB9 458 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 TBC1D15Q8TC07 691 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 THAP11Q96EK4 314 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 SGF29Q96ES7 293 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 MAELQ96JY0 434 aaKnown RBP18.8■□□□□ 0.6
PSPC1-201ENST00000338910 MCMBPQ9BTE3 642 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 C1QTNF1Q9BXJ1 281 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 TASP1Q9H6P5 420 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms