RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 RXRAP19793 462 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 S1PR1P21453 382 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 ITGADQ13349 1161 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 CCNYL2Q5T2Q4 361 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 SLC35E4Q6ICL7 350 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 MTSS1LQ765P7 747 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 C1orf87Q8N0U7 546 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 USP38Q8NB14 1042 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 SPPL3Q8TCT6 385 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 AFG1LQ8WV93 481 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 TRAPPC12Q8WVT3 735 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 ABTB1Q969K4 478 aaPredicted RBP2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 CD180Q99467 661 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 MXRA8Q9BRK3 442 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 SLC32A1Q9H598 525 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 ESRP2Q9H6T0 727 aaKnown RBP2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 FKRPQ9H9S5 495 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 FAF1Q9UNN5 650 aaPredicted RBP2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 CARD8Q9Y2G2 431 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 RRP7AQ9Y3A4 280 aaKnown RBP2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 F5H423 210 aaPredicted RBP2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 DVL1O14640 695 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 MMP2P08253 660 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 CNPP09543 421 aaKnown RBP2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 CLCNKAP51800 687 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 DVL1P1P54792 670 aaPredicted RBP2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 GNB1P62873 340 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 TBL3Q12788 808 aaKnown RBP2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 CTF1Q16619 201 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 MMEL1Q495T6 779 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 SYCP2LQ5T4T6 812 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 ANKRD54Q6NXT1 300 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 KCTD8Q6ZWB6 473 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 KIAA2013Q8IYS2 634 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 FBXL8Q96CD0 374 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 NOD2Q9HC29 1040 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 MKKSQ9NPJ1 570 aaPredicted RBP2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 DDX4Q9NQI0 724 aaKnown RBP2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 PADI1Q9ULC6 663 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 AMDHD2Q9Y303 409 aa2.89□□□□□ -1.95
CBX3P1-201ENST00000325243 B9A039 149 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 BLOC1S5-TXNDC5H3BN57 136 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 ETFAP13804 333 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 DDX5P17844 614 aaKnown RBP2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 AGAP20933 346 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 LUMP51884 338 aaPredicted RBP2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 KRTAP10-8P60410 259 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 CHRNDQ07001 517 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 PRKG1Q13976 671 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 KRT72Q14CN4 511 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 POSTNQ15063 836 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 SERTAD4-AS1Q5TG53 156 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 BSPRYQ5W0U4 402 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 TAOK1Q7L7X3 1001 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 LINGO2Q7L985 606 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 FAM160B2Q86V87 743 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 MOGAT3Q86VF5 341 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 ZNF34Q8IZ26 560 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 RNF113BQ8IZP6 322 aaKnown RBP2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 DSELQ8IZU8 1212 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 BEST2Q8NFU1 509 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 CEP70Q8NHQ1 597 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 ZNF570Q96NI8 536 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 PAGR1Q9BTK6 254 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 FAM118AQ9NWS6 357 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 TMEM160Q9NX00 188 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 FEM1BQ9UK73 627 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 RCOR1Q9UKL0 485 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 PRSS21Q9Y6M0 314 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 STON1Q9Y6Q2 735 aa2.88□□□□□ -1.95
CBX3P1-201ENST00000325243 VWA3AA6NCI4 1184 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 PEX12O00623 359 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 INHBAP08476 426 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 MYOD1P15172 320 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 MAOAP21397 527 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 RRM1P23921 792 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 EIF2S3P41091 472 aaKnown RBP2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 HOXA1P49639 335 aaPredicted RBP2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 HNRNPH2P55795 449 aaKnown RBP2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 NAA25Q14CX7 972 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 ANKRD1Q15327 319 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 ADCK5Q3MIX3 580 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 KRTAP13-3Q3SY46 172 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 TUBB8Q3ZCM7 444 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 SGO1Q5FBB7 561 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 PDSS1Q5T2R2 415 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 SPINK14Q6IE38 97 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 RGMBQ6NW40 437 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 C15orf39Q6ZRI6 1047 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 NOXA1Q86UR1 476 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 HERC6Q8IVU3 1022 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 FTSJ3Q8IY81 847 aaKnown RBP2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 RILPL2Q969X0 211 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 TAOK3Q9H2K8 898 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 KCNN2Q9H2S1 579 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 MROH8Q9H579 483 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 BABAM1Q9NWV8 329 aa2.87□□□□□ -1.95
CBX3P1-201ENST00000325243 ALKBH4Q9NXW9 302 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms