RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CRTAMO95727 393 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 MRPS22P82650 360 aaKnown RBP22.36■■□□□ 1.17
PNKP-201ENST00000322344 MS4A2Q01362 244 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 GNA12Q03113 381 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 GALNT3Q14435 633 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 MMEL1Q495T6 779 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 CLYBLQ8N0X4 340 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 PTERQ96BW5 349 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 B3GALT6Q96L58 329 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 CASD1Q96PB1 797 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 TRIB3Q96RU7 358 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 AARSD1Q9BTE6 412 aaKnown RBP22.36■■□□□ 1.17
PNKP-201ENST00000322344 SLC25A23Q9BV35 468 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 TFB2MQ9H5Q4 396 aaKnown RBP22.36■■□□□ 1.17
PNKP-201ENST00000322344 EPS15L1Q9UBC2 864 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 SUCOQ9UBS9 1254 aaKnown RBP22.36■■□□□ 1.17
PNKP-201ENST00000322344 DNMT3LQ9UJW3 386 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 SLC38A8A6NNN8 435 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 UBFD1O14562 309 aaKnown RBP22.36■■□□□ 1.17
PNKP-201ENST00000322344 SNRPB2P08579 225 aaKnown RBP22.36■■□□□ 1.17
PNKP-201ENST00000322344 KCNC1P48547 511 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 STC1P52823 247 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 AGKQ53H12 422 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 REP15Q6BDI9 236 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 LRRC8DQ7L1W4 858 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 PNPLA1Q8N8W4 532 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 ADCY4Q8NFM4 1077 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 ASB9Q96DX5 294 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 CEP295NLQ96MC4 621 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 GBP5Q96PP8 586 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 CACNA2D2Q9NY47 1150 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 PCDHGA7Q9Y5G6 932 aa22.36■■□□□ 1.17
PNKP-201ENST00000322344 ZCCHC18P0CG32 403 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 ZNF37AP17032 561 aaPredicted RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 HOXD9P28356 352 aaPredicted RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 PMLP29590 882 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 SLC11A1P49279 550 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 ACADVLP49748 655 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 CDH4P55283 916 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 PDAP1Q13442 181 aaKnown RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 LRP8Q14114 963 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 RNF220Q5VTB9 566 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 HACD2Q6Y1H2 254 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 ANKS3Q6ZW76 656 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 LARP4Q71RC2 724 aaKnown RBP eCLIP22.35■■□□□ 1.17
PNKP-201ENST00000322344 RPS27LQ71UM5 84 aaKnown RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 ST13P4Q8IZP2 240 aaPredicted RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 OR52K2Q8NGK3 314 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 OR13C4Q8NGS5 318 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 HMGCLL1Q8TB92 370 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 Q9H521 79 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 SYTL2Q9HCH5 934 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 NLE1Q9NVX2 485 aaPredicted RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 ADA2Q9NZK5 511 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 RIMS3Q9UJD0 308 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 ARIH1Q9Y4X5 557 aaPredicted RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 STX16-NPEPL1H3BU86 382 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 ENPP3O14638 875 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 GJB3O75712 270 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 FGF4P08620 206 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 SELPP16109 830 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 ATP5C1P36542 298 aaKnown RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 SLC11A2P49281 568 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 KCNQ1P51787 676 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 TIAL1Q01085 375 aaKnown RBP eCLIP22.35■■□□□ 1.17
PNKP-201ENST00000322344 CAP1Q01518 475 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 DUSP4Q13115 394 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 SEMA3AQ14563 771 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 RSPO2Q6UXX9 243 aaPredicted RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 FAM43BQ6ZT52 329 aaPredicted RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 C19orf60Q96EN9 201 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 CDKN2AIPNLQ96HQ2 116 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 PSKH2Q96QS6 385 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 TSC22D3Q99576 134 aa22.35■■□□□ 1.17
PNKP-201ENST00000322344 CINPQ9BW66 212 aaPredicted RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 POLR3BQ9NW08 1133 aaPredicted RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 UBA2Q9UBT2 640 aaPredicted RBP22.35■■□□□ 1.17
PNKP-201ENST00000322344 PCNTO95613 3336 aa22.34■■□□□ 1.17
PNKP-201ENST00000322344 PRSS51A0A1B0GVH4 220 aa22.34■■□□□ 1.17
PNKP-201ENST00000322344 STX1BP61266 288 aa22.34■■□□□ 1.17
PNKP-201ENST00000322344 SP3Q02447 781 aa22.34■■□□□ 1.17
PNKP-201ENST00000322344 PPP1R3AQ16821 1122 aa22.34■■□□□ 1.17
PNKP-201ENST00000322344 IL31Q6EBC2 164 aa22.34■■□□□ 1.17
PNKP-201ENST00000322344 PTGR2Q8N8N7 351 aaPredicted RBP22.34■■□□□ 1.17
PNKP-201ENST00000322344 GIPC2Q8TF65 315 aa22.34■■□□□ 1.17
PNKP-201ENST00000322344 DCUN1D1Q96GG9 259 aa22.34■■□□□ 1.17
PNKP-201ENST00000322344 TMEM175Q9BSA9 504 aa22.34■■□□□ 1.17
PNKP-201ENST00000322344 STARD7Q9NQZ5 370 aa22.34■■□□□ 1.17
PNKP-201ENST00000322344 ABT1Q9ULW3 272 aaKnown RBP22.34■■□□□ 1.17
PNKP-201ENST00000322344 CES1P23141 567 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 TRIM25Q14258 630 aaKnown RBP22.33■■□□□ 1.17
PNKP-201ENST00000322344 GRM2Q14416 872 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 PTPRCAPQ14761 206 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 RTP2Q5QGT7 225 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 AFTPHQ6ULP2 937 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 SPNS2Q8IVW8 549 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 CFAP52Q8N1V2 620 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 RNF148Q8N7C7 305 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 PDZD8Q8NEN9 1154 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 RIN3Q8TB24 985 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms