RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 SARDHQ9UL12 918 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 PSME2Q9UL46 239 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 KIAA1257Q9ULG3 409 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 GIT1Q9Y2X7 761 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 ZNF487B1APH4 448 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 AXIN1O15169 862 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 NDUFB5O43674 189 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 CLASP2O75122 1294 aaKnown RBP9.67□□□□□ -0.86
PTPRA-202ENST00000318266 PMPCBO75439 489 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 GMNNO75496 209 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 IPO13O94829 963 aaKnown RBP9.67□□□□□ -0.86
PTPRA-202ENST00000318266 PABPC1P11940 636 aaKnown RBP9.67□□□□□ -0.86
PTPRA-202ENST00000318266 CHRNA4P43681 627 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 HLCSP50747 726 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 PRKAA2P54646 552 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 OCA2Q04671 838 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 BST2Q10589 180 aaKnown RBP9.67□□□□□ -0.86
PTPRA-202ENST00000318266 CDH17Q12864 832 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 CCNYL2Q5T2Q4 361 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 NBPF12Q5TAG4 269 aaPredicted RBP9.67□□□□□ -0.86
PTPRA-202ENST00000318266 CRTC3Q6UUV7 619 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 ANKRD13AQ8IZ07 590 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 PACRGLQ8N7B6 248 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 TRPV3Q8NET8 790 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 C19orf60Q96EN9 201 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 MYRFLQ96LU7 910 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 CCDC138Q96M89 665 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 MCMBPQ9BTE3 642 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 TRIM15Q9C019 465 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 SIX3O95343 332 aaPredicted RBP9.67□□□□□ -0.86
PTPRA-202ENST00000318266 GFAPP14136 432 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 PTPRAP18433 802 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 TCEA1P23193 301 aaKnown RBP9.67□□□□□ -0.86
PTPRA-202ENST00000318266 SLC6A2P23975 617 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 CXCR3P49682 368 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 IST1P53990 364 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 RAB15P59190 212 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 HTRA3P83110 453 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 IFITM3Q01628 133 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 CLCQ05315 142 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 SLC25A52Q3SY17 297 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 BTBD8Q5XKL5 378 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 KCTD11Q693B1 232 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 R3HCC1LQ7Z5L2 792 aaKnown RBP9.67□□□□□ -0.86
PTPRA-202ENST00000318266 TTC16Q8NEE8 873 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 ZFP90Q8TF47 636 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 STARD8Q92502 1023 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 KCNN1Q92952 543 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 HDAC11Q96DB2 347 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 OLFM1Q99784 485 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 GBA3Q9H227 469 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 SMARCAD1Q9H4L7 1026 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 LRRC4Q9HBW1 653 aa9.67□□□□□ -0.86
PTPRA-202ENST00000318266 EML4Q9HC35 981 aaKnown RBP9.67□□□□□ -0.86
PTPRA-202ENST00000318266 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.67□□□□□ -0.86
PTPRA-202ENST00000318266 ZNF638Q14966 1978 aaKnown RBP9.66□□□□□ -0.86
PTPRA-202ENST00000318266 CLDN25C9JDP6 229 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 I6L893 689 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-202ENST00000318266 FXYD1O00168 92 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 LDLRP01130 860 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SLC4A1P02730 911 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 MBL2P11226 248 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-202ENST00000318266 CPB1P15086 417 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 AXLP30530 894 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 NOS2P35228 1153 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 FOXA1P55317 472 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SNX16P57768 344 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 DMPKQ09013 629 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SF3B4Q15427 424 aaKnown RBP eCLIP9.66□□□□□ -0.862e-7■■■■■ 28.8
PTPRA-202ENST00000318266 PCSK7Q16549 785 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 UGT3A2Q3SY77 523 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 OTUD1Q5VV17 481 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-202ENST00000318266 ZNF773Q6PK81 442 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 STK32CQ86UX6 486 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SFRP1Q8N474 314 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 TERB1Q8NA31 727 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 ANKRD49Q8WVL7 239 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 TUBGCP3Q96CW5 907 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 NRBF2Q96F24 287 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 DUS3LQ96G46 650 aaKnown RBP9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SH3YL1Q96HL8 342 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-202ENST00000318266 FUNDC2Q9BWH2 189 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 R3HDMLQ9H3Y0 253 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 ASB7Q9H672 318 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SLAMF8Q9P0V8 285 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 NDUFAF1Q9Y375 327 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SLC30A1Q9Y6M5 507 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 DFFAO00273 331 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 DCLK1O15075 740 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 BCAS1O75363 584 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-202ENST00000318266 MYO1DO94832 1006 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 LINC00032P0C843 101 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 MAGP20916 626 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 GPX3P22352 226 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 TKTP29401 623 aaKnown RBP9.66□□□□□ -0.86
PTPRA-202ENST00000318266 RFC2P35250 354 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 CD151P48509 253 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 KCNC1P48547 511 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 NPY2RP49146 381 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 ATP6V0D1P61421 351 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 1179.4 ms