RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ACOT9Q9Y305 439 aa15.73■□□□□ 0.11
HERPUD1-201ENST00000300302 KLF11O14901 512 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 TRIM24O15164 1050 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 PLIN3O60664 434 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 TULP3O75386 442 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 TOP3BO95985 862 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 FCARP24071 287 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 FAM47EQ6ZV65 393 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 Q6ZVU0 165 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 CCDC197Q8NCU1 140 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 ZFYVE19Q96K21 471 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 TCF12Q99081 682 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 OMDQ99983 421 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 ZDHHC6Q9H6R6 413 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 INTS10Q9NVR2 710 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 DEC1Q9P2X7 70 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 VPS9D1Q9Y2B5 631 aa15.72■□□□□ 0.11
HERPUD1-201ENST00000300302 A0A087X1B8 175 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 CAPN8A6NHC0 703 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 H7C0S8 307 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 PHGDHO43175 533 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 SNX3O60493 162 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 EDF1O60869 148 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 APOA4P06727 396 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 BPGMP07738 259 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 DLDP09622 509 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 ALPIP09923 528 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 SLC35E2BP0CK96 405 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 STC1P52823 247 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 HNRNPH2P55795 449 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 ST8SIA6P61647 398 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 TYSND1Q2T9J0 566 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 LRIT3Q3SXY7 679 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 ZNF789Q5FWF6 425 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 ATG16L1Q676U5 607 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 TANGO2Q6ICL3 276 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 C16orf46Q6P387 395 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 LYSMD3Q7Z3D4 306 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 CCDC91Q7Z6B0 441 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 MFSD6LQ8IWD5 586 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 ETFBKMTQ8IXQ9 262 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 YAF2Q8IY57 180 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 CYB5D2Q8WUJ1 264 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 ECHDC3Q96DC8 303 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 MRGPRX3Q96LB0 322 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 TTYH1Q9H313 450 aaPredicted RBP15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 ECT2Q9H8V3 914 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 ZFYVE1Q9HBF4 777 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 LMCD1Q9NZU5 365 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 IL17CQ9P0M4 197 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 TMEM216Q9P0N5 145 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 SIRPGQ9P1W8 387 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 MID2Q9UJV3 735 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 EMCNQ9ULC0 261 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 STARD13Q9Y3M8 1113 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 C1orf232A0A0U1RR37 186 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 WASH3PC4AMC7 463 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 PROCP04070 461 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 BGNP21810 368 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 MC4RP32245 332 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 POLR2LP62875 67 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 IRX4P78413 519 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 IRF9Q00978 393 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 MLLT1Q03111 559 aaPredicted RBP15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 FCHO2Q0JRZ9 810 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 GRIN2CQ14957 1233 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 AARS2Q5JTZ9 985 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 RNF187Q5TA31 235 aaPredicted RBP15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 HECTD2Q5U5R9 776 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 GRAMD4Q6IC98 578 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 FAM45BPQ6NSW5 357 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 VITQ6UXI7 678 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 USP45Q70EL2 814 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 SPATA21Q7Z572 469 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 LDB1Q86U70 411 aaPredicted RBP15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 C12orf40Q86WS4 652 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 CEP97Q8IW35 865 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 CPA6Q8N4T0 437 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 OR2A12Q8NGT7 310 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 TTC8Q8TAM2 541 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 FAM45AQ8TCE6 357 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 RIPOR3Q96MK2 946 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 NMRAL1Q9HBL8 299 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 BPIFA1Q9NP55 256 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 FKBPLQ9UIM3 349 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 PLA2G4CQ9UP65 541 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 VWA7Q9Y334 891 aa15.71■□□□□ 0.11
HERPUD1-201ENST00000300302 BPTFQ12830 3046 aa15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 HNF1BP35680 557 aa15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 TTPAP49638 278 aa15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 KPNA2P52292 529 aaKnown RBP15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 TAS2R39P59534 338 aa15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 ITIH4Q14624 930 aa15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 TSNAXIP1Q2TAA8 658 aa15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 RBM20Q5T481 1227 aaKnown RBP15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 GDPD4Q6W3E5 623 aa15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 TBC1D1Q86TI0 1168 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 PLD6Q8N2A8 252 aaKnown RBP15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 PPP1R14CQ8TAE6 165 aa15.7■□□□□ 0.1
HERPUD1-201ENST00000300302 FRS2Q8WU20 508 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms