RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 PCDHGC4Q9Y5F7 938 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 COCHO43405 550 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 CBFA2T3O75081 653 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 STAMBPO95630 424 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 THRAP10827 490 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 MYL4P12829 197 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 NELFEP18615 380 aaKnown RBP12.91□□□□□ -0.34
ZIC3-201ENST00000287538 SLC11A2P49281 568 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 NIPAL4Q0D2K0 466 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 FBXO48Q5FWF7 155 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 NXNQ6DKJ4 435 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 BNIPLQ7Z465 357 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 CLSTN3Q9BQT9 956 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 NOL6Q9H6R4 1146 aaKnown RBP12.91□□□□□ -0.34
ZIC3-201ENST00000287538 BIRC5O15392 142 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 FOXD2O60548 495 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 MLNP12872 115 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 TSPAN8P19075 237 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 ITGB8P26012 769 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 WEE1P30291 646 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 SLC6A4P31645 630 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 ATXN3P54252 364 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 CDKL1Q00532 357 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 CSHL1Q14406 222 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 TRIP4Q15650 581 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 ADRM1Q16186 407 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 FRMD7Q6ZUT3 714 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 LINC00523Q86TU6 105 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 LZTR1Q8N653 840 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 TSPAN14Q8NG11 270 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 HDAC10Q969S8 669 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 VAT1Q99536 393 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 NAT9Q9BTE0 207 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 OSBPL6Q9BZF3 934 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 SARS2Q9NP81 518 aaKnown RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 PNPOQ9NVS9 261 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 RALGAPA2Q2PPJ7 1873 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 CHD7Q9P2D1 2997 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 HTR3EA5X5Y0 456 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 TK2O00142 265 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 SNAP91O60641 907 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 SERPINB7O75635 380 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 VNN2O95498 520 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 HSPA4LO95757 839 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 MT-CO1P00395 513 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 ATP5BP06576 529 aaKnown RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 RHOCP08134 193 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 HDCP19113 662 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 MSX2P35548 267 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 ARL1P40616 181 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 MAGEA3P43357 314 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 TUFMP49411 452 aaKnown RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 SGSHP51688 502 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 ZNF177Q13360 481 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 PDCD4Q53EL6 469 aaKnown RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 ZNF789Q5FWF6 425 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 TEDDM1Q5T9Z0 273 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 TIGD7Q6NT04 549 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 RPS27LQ71UM5 84 aaKnown RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 SLC43A3Q8NBI5 491 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 OR52K2Q8NGK3 314 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 CASS4Q9NQ75 786 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 ZCWPW2A0A1B0GU75 182 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 SNNO75324 88 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 AHSGP02765 367 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 BPGMP07738 259 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 PRSS56P0CW18 603 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 RHOQP17081 205 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 SYN1P17600 705 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 NPY2RP49146 381 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 CDK9P50750 372 aaKnown RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 TUBB3Q13509 450 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 NADSYN1Q6IA69 706 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 DNAJB7Q7Z6W7 309 aaPredicted RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 CMTM5Q96DZ9 223 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 HAUS8Q9BT25 410 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 DCUN1D5Q9BTE7 237 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 THAP1Q9NVV9 213 aa12.9□□□□□ -0.34
ZIC3-201ENST00000287538 PDCD11Q14690 1871 aaKnown RBP12.9□□□□□ -0.34
ZIC3-201ENST00000287538 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 FBP2O00757 339 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 GNRH1P01148 92 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 CPA3P15088 417 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 RXRGP48443 463 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 MAP7D1Q3KQU3 841 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 PCID2Q5JVF3 399 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 FAM219BQ5XKK7 198 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 PDPK2PQ6A1A2 396 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 CNSTQ6PJW8 725 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 PIWIL2Q8TC59 973 aaKnown RBP12.89□□□□□ -0.35
ZIC3-201ENST00000287538 MRGPRX2Q96LB1 330 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 TBATAQ96M53 351 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 CPNE1Q99829 537 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 ARL5AQ9Y689 179 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 C1QAP02745 245 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 MAGEA6P43360 314 aa12.89□□□□□ -0.35
ZIC3-201ENST00000287538 NKX3-2P78367 333 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms