RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 SMOQ99835 787 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 RGS17Q9UGC6 210 aaPredicted RBP13.73□□□□□ -0.21
NPC1-201ENST00000269228 SLC27A6Q9Y2P4 619 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 SGTAO43765 313 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 NTRK1P04629 796 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 SEMA5AQ13591 1074 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 DLG2Q15700 870 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 TXNRD3NBQ6F5E7 133 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 FBXL22Q6P050 247 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 RDH11Q8TC12 318 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 PTCD2Q8WV60 388 aaKnown RBP13.73□□□□□ -0.21
NPC1-201ENST00000269228 STARD8Q92502 1023 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 ZFYVE19Q96K21 471 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 SLCO1B3Q9NPD5 702 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 LIMD1Q9UGP4 676 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 NPEPPSL1A6NEC2 478 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 H0Y858 1186 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 PRKAG1P54619 331 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 RPL38P63173 70 aaKnown RBP13.73□□□□□ -0.21
NPC1-201ENST00000269228 MPP1Q00013 466 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 TRMT5Q32P41 509 aaKnown RBP13.73□□□□□ -0.21
NPC1-201ENST00000269228 TJAP1Q5JTD0 557 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 ESRP1Q6NXG1 681 aaKnown RBP13.73□□□□□ -0.21
NPC1-201ENST00000269228 TXNDC11Q6PKC3 985 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 ATG16L2Q8NAA4 619 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 CENPTQ96BT3 561 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 DNAJC1Q96KC8 554 aaKnown RBP13.73□□□□□ -0.21
NPC1-201ENST00000269228 TLR9Q9NR96 1032 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 ADAMTS5Q9UNA0 930 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 RAP2CQ9Y3L5 183 aa13.73□□□□□ -0.21
NPC1-201ENST00000269228 OR2AG2A6NM03 316 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 CACNG1Q06432 222 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 CSTF3Q12996 717 aaKnown RBP13.72□□□□□ -0.21
NPC1-201ENST00000269228 ZNF461Q8TAF7 563 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 PXYLP1Q8TE99 480 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 TPD52L3Q96J77 140 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 GPR88Q9GZN0 384 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 DCLRE1BQ9H816 532 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 PIRO00625 290 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 LRRC73Q5JTD7 316 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 SNX30Q5VWJ9 437 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 CCDC81Q6ZN84 652 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 GPR21Q99679 349 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 CCT7Q99832 543 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 GOLGA4Q13439 2230 aaKnown RBP13.72□□□□□ -0.21
NPC1-201ENST00000269228 TRBV23OR9-2A0A075B6M9 112 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 SAC3D1A6NKF1 404 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 HDAC3O15379 428 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 PFKMP08237 780 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 HGFP14210 728 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 NMBRP28336 390 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 PKNOX1P55347 436 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 C21orf59P57076 290 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 IRX1P78414 480 aaPredicted RBP13.72□□□□□ -0.21
NPC1-201ENST00000269228 SEMG2Q02383 582 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.72□□□□□ -0.21
NPC1-201ENST00000269228 AGMOQ6ZNB7 445 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 ZNF786Q8N393 782 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 CRTAC1Q9NQ79 661 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 PSME2Q9UL46 239 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 ERVW-1Q9UQF0 538 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 PCDHB1Q9Y5F3 818 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 MTMR11A4FU01 709 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 H3BM21 787 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 AZIN1O14977 448 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 SNX3O60493 162 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 ATG13O75143 517 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 PCCBP05166 539 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 ME2P23368 584 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 LRPAP1P30533 357 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 SCNN1AP37088 669 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 CBX2Q14781 532 aaPredicted RBP13.72□□□□□ -0.21
NPC1-201ENST00000269228 FAM98BQ52LJ0 330 aaKnown RBP13.72□□□□□ -0.21
NPC1-201ENST00000269228 CAPRIN2Q6IMN6 1127 aaKnown RBP13.72□□□□□ -0.21
NPC1-201ENST00000269228 C16orf87Q6PH81 154 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 CERS6Q6ZMG9 384 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 ZBTB49Q6ZSB9 765 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 HERVK_113Q902F9 699 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 ADAMTS10Q9H324 1103 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 KCTD5Q9NXV2 234 aa13.72□□□□□ -0.21
NPC1-201ENST00000269228 MYH1P12882 1939 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 BIRC5O15392 142 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 GALTP07902 379 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 FSHRP23945 695 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 EPHA3P29320 983 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 NTSP30990 170 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 TLX1P31314 330 aaPredicted RBP13.71□□□□□ -0.21
NPC1-201ENST00000269228 DSG1Q02413 1049 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 INCA1Q0VD86 236 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 PHYKPLQ8IUZ5 450 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 C8orf48Q96LL4 319 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 PPP3R2Q96LZ3 170 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 NDEL1Q9GZM8 345 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 KRCC1Q9NPI7 259 aaPredicted RBP13.71□□□□□ -0.21
NPC1-201ENST00000269228 INVSQ9Y283 1065 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 NDUFB5O43674 189 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 ZBTB17Q13105 803 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 TSTD2Q5T7W7 516 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms