RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 DCLRE1AQ6PJP8 1040 aa17.48■□□□□ 0.39
TRAM1-201ENST00000262213 Q6ZNX1 250 aa17.48■□□□□ 0.39
TRAM1-201ENST00000262213 CROCCP3Q8IVE0 287 aa17.48■□□□□ 0.39
TRAM1-201ENST00000262213 TNIP2Q8NFZ5 429 aa17.48■□□□□ 0.39
TRAM1-201ENST00000262213 UPF1Q92900 1129 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRAM1-201ENST00000262213 TUBGCP3Q96CW5 907 aa17.48■□□□□ 0.39
TRAM1-201ENST00000262213 RPF2Q9H7B2 306 aaKnown RBP17.48■□□□□ 0.39
TRAM1-201ENST00000262213 AGPAT4Q9NRZ5 378 aa17.48■□□□□ 0.39
TRAM1-201ENST00000262213 DNAJC15Q9Y5T4 150 aa17.48■□□□□ 0.39
TRAM1-201ENST00000262213 RALGAPA2Q2PPJ7 1873 aa17.48■□□□□ 0.39
TRAM1-201ENST00000262213 TANC1Q9C0D5 1861 aa17.48■□□□□ 0.39
TRAM1-201ENST00000262213 H3BMM5 538 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 F9P00740 461 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 IMPDH1P20839 514 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 CCNCP24863 283 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 DNAJB1P25685 340 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 DNAJB2P25686 324 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 POLD2P49005 469 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 AFF1P51825 1210 aaKnown RBP17.47■□□□□ 0.39
TRAM1-201ENST00000262213 ZNF678Q5SXM1 525 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 TWF2Q6IBS0 349 aaKnown RBP17.47■□□□□ 0.39
TRAM1-201ENST00000262213 KCTD8Q6ZWB6 473 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 VPS33AQ96AX1 596 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 USP22Q9UPT9 525 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 VWA7Q9Y334 891 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 J3QRK9 145 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 EEF1B2P24534 225 aaKnown RBP17.47■□□□□ 0.39
TRAM1-201ENST00000262213 ECT2LQ008S8 904 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 CBX3Q13185 183 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 ATP1A4Q13733 1029 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 ZIK1Q3SY52 487 aaPredicted RBP17.47■□□□□ 0.39
TRAM1-201ENST00000262213 PAN2Q504Q3 1202 aaKnown RBP17.47■□□□□ 0.39
TRAM1-201ENST00000262213 DHRS4L2Q6PKH6 230 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 PTGR2Q8N8N7 351 aaPredicted RBP17.47■□□□□ 0.39
TRAM1-201ENST00000262213 DQX1Q8TE96 717 aaKnown RBP17.47■□□□□ 0.39
TRAM1-201ENST00000262213 PTERQ96BW5 349 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 FBXL8Q96CD0 374 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 VPS50Q96JG6 964 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 TSGA13Q96PP4 275 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 TRIM15Q9C019 465 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 ENTPD7Q9NQZ7 604 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 TBC1D23Q9NUY8 699 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 TBC1D13Q9NVG8 400 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 KCTD3Q9Y597 815 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 PPP2R3BQ9Y5P8 575 aa17.47■□□□□ 0.39
TRAM1-201ENST00000262213 B4GAT1O43505 415 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 ZNF189O75820 626 aaPredicted RBP17.46■□□□□ 0.39
TRAM1-201ENST00000262213 SNAP29O95721 258 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 VARSP26640 1264 aaKnown RBP17.46■□□□□ 0.39
TRAM1-201ENST00000262213 HMOX2P30519 316 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 ADRA1AP35348 466 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 ACAP2Q15057 778 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 PFKFB4Q16877 469 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 SLC36A3Q495N2 470 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 SLC44A4Q53GD3 710 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 UBXN11Q5T124 520 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 PM20D1Q6GTS8 502 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 LIMS2Q7Z4I7 341 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 ZNF354CQ86Y25 554 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 SLC22A9Q8IVM8 553 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 MIER2Q8N344 545 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 TRPC4APQ8TEL6 797 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 ROPN1LQ96C74 230 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 C9orf16Q9BUW7 83 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 MARCH4Q9P2E8 410 aaPredicted RBP17.46■□□□□ 0.39
TRAM1-201ENST00000262213 NDUFAF1Q9Y375 327 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 DNAH12Q6ZR08 3092 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 PTGESO14684 152 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 BAIAP3O94812 1187 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 SNX17Q15036 470 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 OTUD3Q5T2D3 398 aaPredicted RBP17.46■□□□□ 0.39
TRAM1-201ENST00000262213 C16orf87Q6PH81 154 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 BHLHA9Q7RTU4 235 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 ADGRG5Q8IZF4 528 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 DHRSXQ8N5I4 330 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 MFSD2AQ8NA29 543 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 TWIST2Q8WVJ9 160 aa17.46■□□□□ 0.39
TRAM1-201ENST00000262213 CENPNQ96H22 339 aaPredicted RBP17.46■□□□□ 0.39
TRAM1-201ENST00000262213 PDCD11Q14690 1871 aaKnown RBP17.46■□□□□ 0.39
TRAM1-201ENST00000262213 UBXN8O00124 270 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 MATN3O15232 486 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 CACNG3O60359 315 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 SMIM10L2AP0DMW4 78 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 SMIM10L2BP0DMW5 78 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 HGFP14210 728 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 KCNE1P15382 129 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 SLC6A2P23975 617 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 ARSDP51689 593 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 ATP6V0D1P61421 351 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 TRAF2Q12933 501 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 PTPRCAPQ14761 206 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 INTS11Q5TA45 600 aaKnown RBP17.45■□□□□ 0.38
TRAM1-201ENST00000262213 SCIMPQ6UWF3 145 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 HACD2Q6Y1H2 254 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 ISCA2Q86U28 154 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 SCAMP5Q8TAC9 235 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 KLHL5Q96PQ7 755 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 IL12RB2Q99665 862 aa17.45■□□□□ 0.38
TRAM1-201ENST00000262213 GPATCH1Q9BRR8 931 aaKnown RBP17.45■□□□□ 0.38
TRAM1-201ENST00000262213 NT5MQ9NPB1 228 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms