RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 THSD7BQ9C0I4 1608 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 NPHS1O60500 1241 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 ADAM23O75077 832 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 TFPTP0C1Z6 253 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 SLC2A3P11169 496 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 ZNF24P17028 368 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 GJA8P48165 433 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 ACLYP53396 1101 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 SP3Q02447 781 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 DSC1Q08554 894 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 NOGQ13253 232 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 TMEM198Q66K66 360 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 KCTD11Q693B1 232 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 ANKRD26P1Q6NSI1 321 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 FAM45BPQ6NSW5 357 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 TMEM135Q86UB9 458 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 ZNF786Q8N393 782 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 TMEM151AQ8N4L1 468 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 SCAIQ8N9R8 606 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 FAM156AQ8NDB6 213 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 OR10T2Q8NGX3 314 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 FAM45AQ8TCE6 357 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 PNPT1Q8TCS8 783 aaKnown RBP10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 TEKT5Q96M29 485 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 SERPINB11Q96P15 392 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 MCMBPQ9BTE3 642 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 C1orf50Q9BV19 199 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 PCDHAC1Q9H158 963 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 FBXO44Q9H4M3 255 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 MRM3Q9HC36 420 aaKnown RBP10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 ANLNQ9NQW6 1124 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 GIN1Q9NXP7 522 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 TMEM181Q9P2C4 612 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 ERGIC3Q9Y282 383 aa10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 FAM32AQ9Y421 112 aaKnown RBP10.84□□□□□ -0.67
CHRNA1-201ENST00000261007 TMEM88BA6NKF7 163 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 K7EPI3 171 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 KCNK1O00180 336 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 SOCS2O14508 198 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 SYN3O14994 580 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 CACNG3O60359 315 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 NOL3O60936 208 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 OAZ2O95190 189 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 GRIK1P39086 918 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 TMBIM6P55061 237 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 RPS3AP61247 264 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 FAM189BP81408 668 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 MPP1Q00013 466 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 IRF9Q00978 393 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 MERTKQ12866 999 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 TRIM32Q13049 653 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 SQLEQ14534 574 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 RGS21Q2M5E4 152 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 ANO4Q32M45 955 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 SLC36A3Q495N2 470 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 NOMO2Q5JPE7 1267 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 C8orf82Q6P1X6 216 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 TMEM53Q6P2H8 277 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 LSMEM2Q8N112 164 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 NPWQ8N729 165 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 DNAAF3Q8N9W5 541 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 KDM1BQ8NB78 822 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 STYXQ8WUJ0 223 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 FAR2Q96K12 515 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 C8orf48Q96LL4 319 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 FCRL3Q96P31 734 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 C9orf16Q9BUW7 83 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 C1QTNF1Q9BXJ1 281 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 UNKQ9C0B0 810 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 TMLHEQ9NVH6 421 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 CACNA2D2Q9NY47 1150 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 KIAA1522Q9P206 1035 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 NLRC5Q86WI3 1866 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 KCNU1A8MYU2 1149 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 I6L893 689 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 SDHDO14521 159 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 TNFRSF10BO14763 440 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 ZBTB24O43167 697 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 ANXA9O76027 345 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 GNRH1P01148 92 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 CKBP12277 381 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 FUT4P22083 530 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 FGFR3P22607 806 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 GMPRP36959 345 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 MAGEA11P43364 429 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 POLD2P49005 469 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 TMED10P49755 219 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 BMXP51813 675 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 NAGLUP54802 743 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 CDH17Q12864 832 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 PMS2P3Q13401 168 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 RAB39AQ14964 217 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 PAN2Q504Q3 1202 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 AARS2Q5JTZ9 985 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 REP15Q6BDI9 236 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 MSANTD2Q6P1R3 559 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 LRRTM3Q86VH5 581 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 DHFR2Q86XF0 187 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms