RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 FAM110CQ1W6H9 321 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 PABPC1LQ4VXU2 614 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 UGT3A1Q6NUS8 523 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TRIM69Q86WT6 500 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 HERC6Q8IVU3 1022 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 C8orf59Q8N0T1 100 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CLYBLQ8N0X4 340 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 PYROXD2Q8N2H3 581 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 FEM1CQ96JP0 617 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 MMP19Q99542 508 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TRIM54Q9BYV2 358 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF395Q9H8N7 513 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ELP3Q9H9T3 547 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ARNT2Q9HBZ2 717 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TMPRSS4Q9NRS4 437 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 POLR3BQ9NW08 1133 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ZNHIT2Q9UHR6 403 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ENOPH1Q9UHY7 261 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TTC3P53804 2025 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 IGLV3-10A0A075B6K4 115 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 H3BNH8 94 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 IGLV3-27P01718 113 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 PORP16435 677 aaPredicted RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 PCSK1P29120 753 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 GNL1P36915 607 aaPredicted RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 CAPGP40121 348 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 OSTNP61366 133 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 CSNK2BP67870 215 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 MYBPC3Q14896 1274 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 FSCN1Q16658 493 aaKnown RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 SDE2Q6IQ49 451 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 TXNDC11Q6PKC3 985 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 NAPRTQ6XQN6 538 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 HFE2Q6ZVN8 426 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 CATSPER4Q7RTX7 472 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 GPR142Q7Z601 462 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 RYBPQ8N488 228 aaPredicted RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 DACH2Q96NX9 599 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 IL12RB2Q99665 862 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 GATA5Q9BWX5 397 aaPredicted RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 NUSAP1Q9BXS6 441 aaKnown RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 SLC2A11Q9BYW1 496 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 NXF3Q9H4D5 531 aaKnown RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 EHD1Q9H4M9 534 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 ZFYVE28Q9HCC9 887 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 USE1Q9NZ43 259 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 GMIPQ9P107 970 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 MAPRE3Q9UPY8 281 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 SNX9Q9Y5X1 595 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 NUP205Q92621 2012 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 TMEM265A0A087WTH1 108 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 MEIS3P2A8K0S8 358 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 MMP2P08253 660 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF286BP0CG31 522 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 TXNP10599 105 aaKnown RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 ETS2P15036 469 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 NFKB1P19838 968 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 CD97P48960 835 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 RGS7P49802 495 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 LILRA4P59901 499 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 SETMARQ53H47 684 aaPredicted RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 SYPL2Q5VXT5 272 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 NOTUMQ6P988 496 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 C17orf99Q6UX52 265 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 ERMP1Q7Z2K6 904 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 PLD3Q8IV08 490 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 SVOPLQ8N434 492 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 EFHD2Q96C19 240 aaPredicted RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 KCTD14Q9BQ13 255 aaPredicted RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 DUSP16Q9BY84 665 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 GBA3Q9H227 469 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 INTS10Q9NVR2 710 aaKnown RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 SMPD3Q9NY59 655 aaPredicted RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 FBXW11Q9UKB1 542 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 TLL2Q9Y6L7 1015 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 FAM95CA0A1B0GW59 222 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 ARHGEF9O43307 516 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 MRPS14O60783 128 aaKnown RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 VTNP04004 478 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 GRIA2P42262 883 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 EEFSECP57772 596 aaKnown RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 YWHAHQ04917 246 aaPredicted RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 IL18R1Q13478 541 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 NFYCQ13952 458 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 LSM12Q3MHD2 195 aaKnown RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 RALGPS1Q5JS13 557 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 IQSEC1Q6DN90 963 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 SNRNP27Q8WVK2 155 aaKnown RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 TRUB1Q8WWH5 349 aaKnown RBP4.15□□□□□ -1.74
UBE4A-201ENST00000252108 UPF1Q92900 1129 aaKnown RBP eCLIP4.15□□□□□ -1.744e-6■■■□□ 17.1
UBE4A-201ENST00000252108 OTUD5Q96G74 571 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 SLC39A13Q96H72 371 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 ABHD8Q96I13 439 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 GPR22Q99680 433 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 KIFC1Q9BW19 673 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 ANKRD60Q9BZ19 345 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 CXorf21Q9HAI6 301 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 MIOSQ9NXC5 875 aa4.15□□□□□ -1.74
UBE4A-201ENST00000252108 DAPK2Q9UIK4 370 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 235 ms