RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 BBS2Q9BXC9 721 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 AKTIPQ9H8T0 292 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF556Q9HAH1 456 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 DNAJB4Q9UDY4 337 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SLC2A6Q9UGQ3 507 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 KIAA1551Q9HCM1 1747 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 A0A088AWK7 358 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 USP2O75604 605 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 COL6A2P12110 1019 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ALDH4A1P30038 563 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 AXLP30530 894 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ATP6V1E1P36543 226 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF157P51786 506 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SLC5A3P53794 718 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ARHGAP36Q6ZRI8 547 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TOP6BLQ8N6T0 577 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 MTG1Q9BT17 334 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 C6orf62Q9GZU0 229 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 OXSMQ9NWU1 459 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TRPV2Q9Y5S1 764 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ENPP3O14638 875 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 RAD51BO15315 384 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 RGS20O76081 388 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 UGT1A6P19224 532 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 NRG1Q02297 640 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SPIDRQ14159 915 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 CPSF7Q8N684 471 aaKnown RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 PPTC7Q8NI37 304 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 NRG4Q8WWG1 115 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 HBEGFQ99075 208 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 FANCEQ9HB96 536 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 PCDH12Q9NPG4 1184 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ZDHHC2Q9UIJ5 367 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 DUSP12Q9UNI6 340 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TDRKHQ9Y2W6 561 aaKnown RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TPRKBQ9Y3C4 175 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 POLR3HQ9Y535 204 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 PPP2R3BQ9Y5P8 575 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 RTTNQ86VV8 2226 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 A0A1B0GVG6 124 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF197O14709 1029 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 WDR47O94967 919 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ANXA6P08133 673 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TFPTP0C1Z6 253 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 HUNKP57058 714 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 RHOAP61586 193 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 MRPS6P82932 125 aaKnown RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ARHGEF7Q14155 803 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TMEM63BQ5T3F8 832 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 DCLRE1AQ6PJP8 1040 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 NAPRTQ6XQN6 538 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TBATAQ96M53 351 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 FCRL3Q96P31 734 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 PARVBQ9HBI1 364 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TMEM161AQ9NX61 479 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SELENONQ9NZV5 590 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 IPPQ9Y573 584 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ARHGEF9O43307 516 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SEC24AO95486 1093 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 EDN1P05305 212 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF135P52742 658 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 NADK2Q4G0N4 442 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 MBLAC2Q68D91 279 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 POTEHQ6S545 545 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ANKRD23Q86SG2 305 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TXNDC5Q8NBS9 432 aaKnown RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SNX27Q96L92 541 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 MLPHQ9BV36 600 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 OXCT2Q9BYC2 517 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ATP13A1Q9HD20 1204 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TLR8Q9NR97 1041 aaKnown RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 COPG1Q9Y678 874 aaKnown RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 AOC1P19801 751 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 HK2P52789 917 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 PPIL2Q13356 520 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TTLL9Q3SXZ7 439 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 EPGNQ6UW88 154 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 CROCCP3Q8IVE0 287 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 UNC93B1Q9H1C4 597 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SOX17Q9H6I2 414 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ZFYVE28Q9HCC9 887 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 RAB26Q9ULW5 256 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 DERAQ9Y315 318 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SH3BP1Q9Y3L3 701 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ZNFX1Q9P2E3 1918 aaKnown RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 COL1A2P08123 1366 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 LAMB2P55268 1798 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 E7ESA3 106 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 KLF11O14901 512 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 ZBTB14O43829 449 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 HLA-DQB2P05538 268 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 MAGP20916 626 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 SLC7A1P30825 629 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 CDH18Q13634 790 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 HERC3Q15034 1050 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 TSTD2Q5T7W7 516 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 EGFLAMQ63HQ2 1017 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 BORCS5Q969J3 196 aa4.61□□□□□ -1.67
VPS13C-201ENST00000249837 FBRSL1Q9HCM7 1045 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms