RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 PRKG2Q13237 762 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 PLCL1Q15111 1095 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 USP39Q53GS9 565 aaKnown RBP19.88■□□□□ 0.77
SOX4-201ENST00000244745 UROC1Q96N76 676 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 HOPXQ9BPY8 73 aaPredicted RBP19.88■□□□□ 0.77
SOX4-201ENST00000244745 DNMT3LQ9UJW3 386 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 ATP6V1G1O75348 118 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 OTCP00480 354 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 UNGP13051 313 aaPredicted RBP19.88■□□□□ 0.77
SOX4-201ENST00000244745 CTPS1P17812 591 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 S100A1P23297 94 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 ATN1P54259 1190 aaPredicted RBP19.88■□□□□ 0.77
SOX4-201ENST00000244745 GRM3Q14832 879 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 ZCCHC8Q6NZY4 707 aaKnown RBP19.88■□□□□ 0.77
SOX4-201ENST00000244745 CYP20A1Q6UW02 462 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 CDK20Q8IZL9 346 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 FCRL2Q96LA5 508 aaPredicted RBP19.88■□□□□ 0.77
SOX4-201ENST00000244745 CACNA1FO60840 1977 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 CYP7B1O75881 506 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 NOS3P29474 1203 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 TIGD2Q4W5G0 525 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 PMF1Q6P1K2 205 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 SLC26A9Q7LBE3 791 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 OR2T34Q8NGX1 318 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 OR2T3Q8NH03 318 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 GPR152Q8TDT2 470 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 GPR20Q99678 358 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 TINF2Q9BSI4 451 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 GBA3Q9H227 469 aa19.88■□□□□ 0.77
SOX4-201ENST00000244745 MSI1O43347 362 aaKnown RBP19.87■□□□□ 0.77
SOX4-201ENST00000244745 TEX44Q53QW1 395 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 PGAM4Q8N0Y7 254 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 GPC2Q8N158 579 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 RPRD1BQ9NQG5 326 aaKnown RBP19.87■□□□□ 0.77
SOX4-201ENST00000244745 XRN1Q8IZH2 1706 aaKnown RBP19.87■□□□□ 0.77
SOX4-201ENST00000244745 H3BNX3 289 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 GCATO75600 419 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 IPO13O94829 963 aaKnown RBP19.87■□□□□ 0.77
SOX4-201ENST00000244745 MC4RP32245 332 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 FAR1Q8WVX9 515 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 LPGAT1Q92604 370 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 DKK3Q9UBP4 350 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 ZNHIT2Q9UHR6 403 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 WBP11Q9Y2W2 641 aaKnown RBP19.87■□□□□ 0.77
SOX4-201ENST00000244745 SQORQ9Y6N5 450 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 SPEF2Q9C093 1822 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 UGT1A9O60656 530 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 TGM3Q08188 693 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 ATAD3BQ5T9A4 648 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 CHMP1BQ7LBR1 199 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 PAGE2Q7Z2X7 111 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 EMID1Q96A84 441 aaPredicted RBP19.87■□□□□ 0.77
SOX4-201ENST00000244745 LENG8Q96PV6 779 aaPredicted RBP19.87■□□□□ 0.77
SOX4-201ENST00000244745 UGT1A7Q9HAW7 530 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 UGT1A10Q9HAW8 530 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 UGT1A8Q9HAW9 530 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 WRAP73Q9P2S5 460 aaPredicted RBP19.87■□□□□ 0.77
SOX4-201ENST00000244745 CIDEBQ9UHD4 219 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 FADS3Q9Y5Q0 445 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 IGKV6D-41A0A0C4DH26 115 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 PRKCQQ04759 706 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 ACSBG2Q5FVE4 666 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 CLEC6AQ6EIG7 209 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 LRRC49Q8IUZ0 686 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 C1orf127Q8N9H9 656 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 AZIN2Q96A70 460 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.87■□□□□ 0.77
SOX4-201ENST00000244745 SLC27A5Q9Y2P5 690 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 DERAQ9Y315 318 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 PAICSP22234 425 aaKnown RBP19.87■□□□□ 0.77
SOX4-201ENST00000244745 SRP54P61011 504 aaKnown RBP19.87■□□□□ 0.77
SOX4-201ENST00000244745 ATP6V0D1P61421 351 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 GATAD2AQ86YP4 633 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 BTBD9Q96Q07 612 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 OR52E6Q96RD3 313 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 DPEP3Q9H4B8 488 aa19.87■□□□□ 0.77
SOX4-201ENST00000244745 CCNFP41002 786 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 PPIL2Q13356 520 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 LSM12Q3MHD2 195 aaKnown RBP19.86■□□□□ 0.77
SOX4-201ENST00000244745 RHBDF2Q6PJF5 856 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 LRTOMTQ8WZ04 291 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 CLN6Q9NWW5 311 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 PTCH2Q9Y6C5 1203 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 M0R2N6 131 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 CDK18Q07002 472 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 ARL13AQ5H913 290 aaPredicted RBP19.86■□□□□ 0.77
SOX4-201ENST00000244745 RTL3Q8N8U3 475 aaKnown RBP19.86■□□□□ 0.77
SOX4-201ENST00000244745 TM6SF2Q9BZW4 377 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 TOR4AQ9NXH8 423 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 TELO2Q9Y4R8 837 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 TBL1XO60907 577 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 RNASEH1O60930 286 aaKnown RBP19.86■□□□□ 0.77
SOX4-201ENST00000244745 PRDX6P30041 224 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 ZNF384Q8TF68 577 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 MRPL48Q96GC5 212 aaKnown RBP19.86■□□□□ 0.77
SOX4-201ENST00000244745 VPS35Q96QK1 796 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 TSPAN9O75954 239 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 TRAP1Q12931 704 aaKnown RBP19.86■□□□□ 0.77
SOX4-201ENST00000244745 CRY2Q49AN0 593 aa19.86■□□□□ 0.77
SOX4-201ENST00000244745 CRTC3Q6UUV7 619 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms