RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 USP12O75317 370 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 AQP1P29972 269 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 FAAP100Q0VG06 881 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 SPIN3Q5JUX0 258 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 CD302Q8IX05 232 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 GHDCQ8N2G8 530 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 NDNQ99608 321 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 FKBP7Q9Y680 259 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 RIIAD1A6NNX1 92 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 SLC25A27O95847 323 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 THEGLP0DJG4 465 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 MASP1P48740 699 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 CSTF1Q05048 431 aaKnown RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 ZNF697Q5TEC3 545 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 TMC3Q7Z5M5 1100 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 SLC39A8Q9C0K1 460 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 BPIFA1Q9NP55 256 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 TIMM13Q9Y5L4 95 aaPredicted RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 KDM5CP41229 1560 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 CCNE2O96020 404 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 CATP04040 527 aaKnown RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 HGFP14210 728 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 NELFEP18615 380 aaKnown RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 UGT2B11O75310 529 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 ILF2Q12905 390 aaKnown RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 PITRM1Q5JRX3 1037 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 SMG7Q92540 1137 aaKnown RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 ERGIC2Q96RQ1 377 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 ZNF69Q9UC07 566 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 CDC42BPBQ9Y5S2 1711 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 NARSO43776 548 aaKnown RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 AMPD1P23109 780 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 IFI35P80217 286 aaPredicted RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 AMIGO2Q86SJ2 522 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 TCEAL3Q969E4 200 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 CAVIN3Q969G5 261 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 CCDC120Q96HB5 630 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 ABCG4Q9H172 646 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 TSPAN16Q9UKR8 245 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 COL15A1P39059 1388 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 PLK4O00444 970 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 SP100P23497 879 aaPredicted RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 ALDH4A1P30038 563 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.078e-8■■■□□ 16.6
SPTLC2-201ENST00000216484 TUBA3EQ6PEY2 450 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 C1orf216Q8TAB5 229 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 BRSK1Q8TDC3 778 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 ACOT12Q8WYK0 555 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 MCCC1Q96RQ3 725 aaPredicted RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 DCLK3Q9C098 648 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 TKTL2Q9H0I9 626 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 XPNPEP3Q9NQH7 507 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 DNMT3LQ9UJW3 386 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 ABCC10Q5T3U5 1492 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 REM1O75628 298 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 IL1BP01584 269 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 GLI1P08151 1106 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 UQCRC1P31930 480 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 PITPNAQ00169 270 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 MAPK14Q16539 360 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 TTMPQ5BVD1 217 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 SGMS1Q86VZ5 419 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 CLEC10AQ8IUN9 316 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 PNPT1Q8TCS8 783 aaKnown RBP14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 NXPE2Q96DL1 559 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 TUBGCP5Q96RT8 1024 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 IFT52Q9Y366 437 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 CAPN6Q9Y6Q1 641 aa14.62□□□□□ -0.07
SPTLC2-201ENST00000216484 E2F3O00716 465 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 IPO13O94829 963 aaKnown RBP14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 LINGO3P0C6S8 592 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 TUBA4AP68366 448 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 TUBA3CQ13748 450 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 CCNB1IP1Q9NPC3 277 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 CARD8Q9Y2G2 431 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 SLC27A6Q9Y2P4 619 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 ISM1B1AKI9 464 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 ORC5O43913 435 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 RPL21P46778 160 aaKnown RBP14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 ELF3P78545 371 aaPredicted RBP14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 FBXO47Q5MNV8 452 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 ALG1LQ6GMV1 187 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 SMARCD3Q6STE5 483 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 RASAL3Q86YV0 1011 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 PPP3R2Q96LZ3 170 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 IDI2Q9BXS1 227 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 BARX2Q9UMQ3 279 aaPredicted RBP14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 STOMP27105 288 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 MFSD10Q14728 455 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 VMACQ2NL98 169 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 BEND4Q6ZU67 534 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 FAM83AQ86UY5 434 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 ZNF227Q86WZ6 799 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 GPR65Q8IYL9 337 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 NOL11Q9H8H0 719 aaKnown RBP14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 BRD9Q9H8M2 597 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 ATXN10Q9UBB4 475 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 EVPLQ92817 2033 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 BCKDKO14874 412 aa14.61□□□□□ -0.07
SPTLC2-201ENST00000216484 OR3A3P47888 321 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms