RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 SERPINF2P08697 491 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 HLA-DPA1P20036 260 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 CA4P22748 312 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 ADRA1AP35348 466 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 GP5P40197 560 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 HADHAP40939 763 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 DPP6P42658 865 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 ATXN3P54252 364 aaPredicted RBP12.3□□□□□ -0.44
SNU13-201ENST00000215956 WNT3AP56704 352 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 RPS24P62847 133 aaKnown RBP12.3□□□□□ -0.44
SNU13-201ENST00000215956 MRPS21P82921 87 aaKnown RBP12.3□□□□□ -0.44
SNU13-201ENST00000215956 SLC10A7Q0GE19 358 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 CDH18Q13634 790 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 EFTUD2Q15029 972 aaKnown RBP eCLIP12.3□□□□□ -0.443e-6■■■■□ 23.5
SNU13-201ENST00000215956 ANKRD20A4Q4UJ75 823 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 GRTP1Q5TC63 336 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 LYSMD4Q5XG99 296 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 PDPK2PQ6A1A2 396 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 ALG1LQ6GMV1 187 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 TIFABQ6ZNK6 161 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 HDDC3Q8N4P3 179 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 CHCHD4Q8N4Q1 142 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 KIAA1958Q8N8K9 716 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 ACMSDQ8TDX5 336 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 MRRFQ96E11 262 aaKnown RBP12.3□□□□□ -0.44
SNU13-201ENST00000215956 MGME1Q9BQP7 344 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 SPON2Q9BUD6 331 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 ACE2Q9BYF1 805 aaPredicted RBP12.3□□□□□ -0.44
SNU13-201ENST00000215956 IQCGQ9H095 443 aaKnown RBP12.3□□□□□ -0.44
SNU13-201ENST00000215956 LINC00597Q9H2U6 94 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 MBD1Q9UIS9 605 aaPredicted RBP12.3□□□□□ -0.44
SNU13-201ENST00000215956 GPSM3Q9Y4H4 160 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 PLXNB3Q9ULL4 1909 aa12.3□□□□□ -0.44
SNU13-201ENST00000215956 FLNBO75369 2602 aaKnown RBP12.3□□□□□ -0.44
SNU13-201ENST00000215956 PMPCBO75439 489 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 CFIP05156 583 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 FGF1P05230 155 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 TCF3P15923 654 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 ACVRL1P37023 503 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 NIPAL4Q0D2K0 466 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 SLC12A1Q13621 1099 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 UGP2Q16851 508 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 GAB4Q2WGN9 574 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 PEAR1Q5VY43 1037 aaPredicted RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 RNF219Q5W0B1 726 aaPredicted RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 KDELC1Q6UW63 502 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 RANBP10Q6VN20 620 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 CARNMT1Q8N4J0 409 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 FRMD1Q8N878 549 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 ANKRD42Q8N9B4 389 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 DCAF4L2Q8NA75 395 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 TXNDC5Q8NBS9 432 aaKnown RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 SPATA22Q8NHS9 363 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 BCAS4Q8TDM0 211 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 PEX13Q92968 403 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 TADA1Q96BN2 335 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 IFT43Q96FT9 208 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 CHMP6Q96FZ7 201 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 FEM1CQ96JP0 617 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 MRGPRX2Q96LB1 330 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 PSKH2Q96QS6 385 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 GTPBP2Q9BX10 602 aaKnown RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 FSCN3Q9NQT6 498 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 MKS1Q9NXB0 559 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 UBP1Q9NZI7 540 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 CFAP97Q9P2B7 532 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 TBC1D14Q9P2M4 693 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 PILRBQ9UKJ0 227 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 HELZ2Q9BYK8 2649 aaKnown RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 LEFTY2O00292 366 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 GFRA2O00451 464 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 NDUFAB1O14561 156 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 TSPAN3O60637 253 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 USP12O75317 370 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 FAM107AO95990 144 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 MT-CYBP00156 380 aaPredicted RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 C1QAP02745 245 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 KRT4P19013 534 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 ITPKAP23677 461 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 HOXD9P28356 352 aaPredicted RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 SPRP35270 261 aaPredicted RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 HOXD12P35452 270 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 CD86P42081 329 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 SERPINH1P50454 418 aaKnown RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 CSE1LP55060 971 aaKnown RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 ZNF423Q2M1K9 1284 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 SOWAHCQ53LP3 525 aaPredicted RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 INO80DQ53TQ3 878 aaPredicted RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 RETSATQ6NUM9 610 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 C19orf48Q6RUI8 117 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 RAB44Q7Z6P3 723 aaPredicted RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 PRPF39Q86UA1 669 aaKnown RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 TAX1BP1Q86VP1 789 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 SPATS2Q86XZ4 545 aaKnown RBP12.29□□□□□ -0.44
SNU13-201ENST00000215956 MFN1Q8IWA4 741 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 LMNTD2Q8IXW0 634 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 OR7D4Q8NG98 312 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 CALML6Q8TD86 181 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 APOPT1Q96IL0 206 aa12.29□□□□□ -0.44
SNU13-201ENST00000215956 CABS1Q96KC9 395 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms