RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ZBED3Q96IU2 234 aaPredicted RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 AIF1LQ9BQI0 150 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 IRS2Q9Y4H2 1338 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 FAM237BA0A1B0GVD1 139 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 ILVBLA1L0T0 632 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 MTMR11A4FU01 709 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 RHPN2P1A8MT19 583 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 H0Y858 1186 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 PPEF2O14830 753 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 ZBTB22O15209 634 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 TM7SF2O76062 418 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 HNF4AP41235 474 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 GRIA4P48058 902 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 COPZ1P61923 177 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 SF1Q15637 639 aaKnown RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 ARCQ7LC44 396 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 R3HCC1LQ7Z5L2 792 aaKnown RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 TMEM110Q86TL2 294 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 CYP4Z2PQ8N1L4 340 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 CLEC4CQ8WTT0 213 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 OSBPL2Q9H1P3 480 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 NMUR1Q9HB89 426 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 GKN1Q9NS71 199 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 FNIP2Q9P278 1114 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF232Q9UNY5 417 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 SNX13Q9Y5W8 968 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 SNX10Q9Y5X0 201 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 M0R3G1 203 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 SLC31A1O15431 190 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 KCNH1O95259 989 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 TBX18O95935 607 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 GSNP06396 782 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 MYBL2P10244 700 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 POU1F1P28069 291 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 CCR4P51679 360 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 HK2P52789 917 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 PWP1Q13610 501 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 NDUFA9Q16795 377 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 INTS11Q5TA45 600 aaKnown RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 DNAJC14Q6Y2X3 702 aaPredicted RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF567Q8N184 647 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 BRSK1Q8TDC3 778 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 OVCA2Q8WZ82 227 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 TRIT1Q9H3H1 467 aaKnown RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 CCSER2Q9H7U1 834 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 RXFP1Q9HBX9 757 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 CCDC167Q9P0B6 97 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 XPR1Q9UBH6 696 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 REXO2Q9Y3B8 237 aaKnown RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 RGPD5Q99666 1765 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 FCHO1O14526 889 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 LRPAP1P30533 357 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 TOMM20Q15388 145 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 AGMOQ6ZNB7 445 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 PIF1Q9H611 641 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 PNPLA8Q9NP80 782 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 SIX2Q9NPC8 291 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 KCNK4Q9NYG8 393 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 OR10H1Q9Y4A9 318 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 TCAF1Q9Y4C2 921 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 RNF225M0QZC1 329 aaPredicted RBP10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF623O75123 536 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 HGFP14210 728 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 TIE1P35590 1138 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 IFNGR2P38484 337 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 TEAD2Q15562 447 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 DPYSL2Q16555 572 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 GSTA3Q16772 222 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 LIPMQ5VYY2 423 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 DEFB107AQ8IZN7 70 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 CDYL2Q8N8U2 506 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 PIWIL2Q8TC59 973 aaKnown RBP10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 TTLL2Q9BWV7 592 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 SDCBP2Q9H190 292 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 ERVK-5Q9HDB9 667 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 ENOPH1Q9UHY7 261 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 COL16A1Q07092 1604 aaPredicted RBP10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 H3BQF6 201 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 PTPN4P29074 926 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 RAD23AP54725 363 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 HADHBP55084 474 aaKnown RBP10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 TRAF2Q12933 501 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 TRIM32Q13049 653 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 HECTD2Q5U5R9 776 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 SLC39A4Q6P5W5 647 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 FUKQ8N0W3 1084 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 ATG16L2Q8NAA4 619 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 CLIP3Q96DZ5 547 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 CORO1CQ9ULV4 474 aaPredicted RBP10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 STYXL1Q9Y6J8 313 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 GJA1P17302 382 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 GATMP50440 423 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 PRKAG1P54619 331 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 RPS24P62847 133 aaKnown RBP10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 LDLRAP1Q5SW96 308 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 LPCAT2Q7L5N7 544 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 TMCO5AQ8N6Q1 288 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 NIPA2Q8N8Q9 360 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 KLHL23Q8NBE8 558 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms