RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Tas2r16P59529 299 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Atp5jP97450 108 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Pfdn6Q03958 127 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cd36Q08857 472 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Znf800Q0VEE6 662 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Mocs1Q5RKZ7 636 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Xlr3aQ60595 226 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ubtd2Q6PGH0 234 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Olfr834Q7TRG8 312 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 TdrkhQ80VL1 560 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gtf2a2Q80ZM7 109 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Shc2Q8BMC3 573 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Morc4Q8BMD7 928 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 C5ar2Q8BW93 344 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Impg1Q8R1W8 798 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Pramel1Q99MW3 458 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Lsm12Q9D0R8 195 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ap2b1Q9DBG3 937 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 HemgnQ9ERZ0 503 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Capn10Q9ESK3 666 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Jph2Q9ET78 696 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Prl5a1Q9JII2 230 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cog8Q9JJA2 640 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gria3Q9Z2W9 888 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Shroom3Q9QXN0 1986 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gm13128L7MU96 475 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Nedd9O35177 833 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Sdc4O35988 198 aaKnown RBP13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 CidebO70303 219 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Pde9aO70628 534 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 PdgfaP20033 211 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Casp2P29594 452 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Rps24P62849 133 aaKnown RBP13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cyth2P63034 400 aaKnown RBP13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Tmem207P86045 143 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ccdc160Q3UYG1 323 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ltbp3Q61810 1268 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Stmnd1Q6P3A1 279 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Tlr12Q6QNU9 906 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Trnau1apQ80VC6 287 aaKnown RBP13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Zbtb33Q8BN78 671 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Kansl2Q8BQR4 486 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Clasp2Q8BRT1 1286 aaKnown RBP13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 4921511C20RikQ8BVT7 469 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Dennd1cQ8CFK6 786 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Q8CIL4 281 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ago1Q8CJG1 857 aaKnown RBP13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Taf12Q8VE65 161 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 BsndQ8VIM4 307 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Pcdhb10Q91VE5 797 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cyp2c70Q91W64 489 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Vps28Q9D1C8 221 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cdh17Q9R100 827 aa13.36□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gbf1Q6DFZ1 1861 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Vwa8Q8CC88 1905 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Znf536Q8K083 1302 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Zbed5B2RPU8 756 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ccdc175E9PVB3 822 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gm3526E9PZM0 191 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Zfp846G3X996 541 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ech1O35459 327 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 M6prP24668 278 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 E2f2P56931 443 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Krt80Q0VBK2 452 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Foxr1Q3UTB7 268 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Foxd4Q60688 444 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Hspa1aQ61696 641 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Atp4aQ64436 1033 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Dennd2cQ6P9P8 914 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Mtmr12Q80TA6 747 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Arhgef38Q80VK6 770 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Arl5aQ80ZU0 179 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Usp1Q8BJQ2 784 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 DseQ8BLI4 958 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Pcyox1lQ8C7K6 495 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cabcoco1Q8CDT7 208 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 TwnkQ8CIW5 685 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Lin7aQ8JZS0 233 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Dync1li1Q8R1Q8 523 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Olfr846Q8VET8 312 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 DcxrQ91X52 244 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Rpl17Q9CPR4 184 aaKnown RBP13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Glod4Q9CPV4 298 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ndufb5Q9CQH3 189 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Pih1d1Q9CQJ2 290 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 AenQ9CZI9 336 aaKnown RBP13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 4933425L06RikQ9D3Z8 585 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 PgcQ9D7R7 392 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ifrd2Q9D8U0 441 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Tnfaip8l2Q9D8Y7 184 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ddx59Q9DBN9 619 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Isca2Q9DCB8 154 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Maged2Q9ER67 616 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gprc5dQ9JIL6 344 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Slc12a4Q9JIS8 1085 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Capn15Q9JLG8 1095 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Asb4Q9WV71 426 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Atp6v1c1Q9Z1G3 382 aa13.35□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Vmn2r96E9PZU5 664 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Galnt4O08832 578 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms