RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Them6Q80ZW2 207 aa22.76■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Cnpy4Q8BQ47 245 aa22.76■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Fem1cQ8CEF1 617 aa22.76■■□□□ 1.23
Scn1b-201ENSMUST00000098548 BlmhQ8R016 455 aa22.76■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Pglyrp2Q8VCS0 530 aa22.76■■□□□ 1.23
Scn1b-201ENSMUST00000098548 AadacQ99PG0 398 aa22.76■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Unc80Q8BLN6 3261 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Gm2956E9PVJ0 216 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Prdx3P20108 257 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Arf5P84084 180 aaKnown RBP22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Heatr6Q6P1G0 1184 aaKnown RBP22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 ItpkcQ7TS72 678 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Adamtsl4Q80T21 1036 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Spp2Q8K1I3 203 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 MfrpQ8K480 584 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 RabepkQ8VCH5 380 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Tcf7l2Q924A0 459 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Exoc2Q9D4H1 924 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Cnbd2Q9D5U8 673 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Sun1Q9D666 913 aaKnown RBP22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Fbxl12Q9EPX5 326 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Mfap5Q9QZJ6 164 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Vmn2r25W4VSP2 855 aa22.75■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Adamts14E9PX39 1209 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 MutP16332 748 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Dsc1P55849 886 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Cdk7Q03147 346 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Glp2rQ5IXF8 512 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Fbxw10Q5SUS0 1030 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Fam221bQ8C627 487 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Mgat5Q8R4G6 740 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Vps39Q8R5L3 886 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Pcdha5Q91Y15 934 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 RhojQ9ER71 214 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 CasrQ9QY96 1079 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Cldn3Q9Z0G9 219 aa22.74■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Gm3854A0A1B0GSS6 495 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Zfp952B0V2W4 504 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Slc9a3G3X939 829 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Nedd9O35177 833 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 TecP24604 630 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Adh5P28474 374 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Epas1P97481 874 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 HadhQ61425 314 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Zbtb41Q811F1 908 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Calhm5Q8R100 309 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 TectaO08523 2155 aa22.73■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Cilp2D3Z7H8 1162 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Slc7a2P18581 657 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Ranbp1P34022 203 aaKnown RBP22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Smpdl3bP58242 456 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Cntn5P68500 1098 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Psmb4P99026 264 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Lrriq3Q14DL3 633 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Meaf6Q2VPQ9 191 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Fam131bQ3TY60 332 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Stard3Q61542 446 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Ssxb5Q6XAS2 159 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Trpm4Q7TN37 1213 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Hamp2Q80T19 83 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Proser2Q8C5R2 471 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Nudcd3Q8R1N4 363 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 AslQ91YI0 464 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Zfp655Q9CZP3 541 aaKnown RBP22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Actrt2Q9D9L5 377 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Nxpe3B9EKK6 559 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Vmn2r10K7N621 847 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Serpini1O35684 410 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Pde8aO88502 823 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Bcl6P41183 707 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Hsd17b4P51660 735 aaKnown RBP22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 OtulinQ3UCV8 352 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Drc1Q3USS3 753 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 GkQ64516 559 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 TdrkhQ80VL1 560 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Nup93Q8BJ71 819 aaKnown RBP22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Cyp2c70Q91W64 489 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Nrif1Q923B3 828 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Mrpl57Q9CQF8 102 aaKnown RBP22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Fgfr1op2Q9CRA9 253 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Lrrc40Q9CRC8 602 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 NagaQ9QWR8 415 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 H2afb2S4R1M3 115 aa22.72■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Chd7A2AJK6 2986 aaKnown RBP22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 A0A286YCD0 109 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 RlfA2A7F4 1918 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Mkrn2osD3Z393 217 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 PiggD3Z3Y1 983 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Ism2D3Z6A3 493 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 5730507C01RikJ3QPX0 416 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 NmbrO54799 390 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Per3O70361 1113 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Sipa1P46062 1037 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Fam47cQ14BE7 430 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Hs3st2Q673U1 367 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 DgkqQ6P5E8 934 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Olfr1062Q7TR71 315 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 C8bQ8BH35 589 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Gm6377Q8BHV4 303 aa22.71■■□□□ 1.23
Scn1b-201ENSMUST00000098548 Ptk7Q8BKG3 1062 aa22.71■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms