RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Ndst1Q3UHN9 882 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rassf5Q5EBH1 413 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Prkg2Q61410 762 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Dlg4Q62108 724 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tas2r102Q7M717 329 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Sra1Q80VJ2 232 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Adgrg1Q8K209 687 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Bco2Q99NF1 532 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Wdr55Q9CX97 388 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ptdss2Q9Z1X2 473 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Iqsec2Q5DU25 1478 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gm29394H3BIW7 199 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Fscn1Q61553 493 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tgoln2Q62314 363 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ugt2a1Q80X89 528 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mterf3Q8R3J4 412 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Carm1Q9WVG6 608 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tpst2O88856 376 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 PklrP53657 574 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tnks2Q3UES3 1166 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mgat5bQ765H6 792 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gprc5aQ8BHL4 356 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Acad10Q8K370 1069 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr170Q8VGL6 313 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Clcc1Q99LI2 539 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Wdr61Q9ERF3 305 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 MthfrQ9WU20 654 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tll2Q9WVM6 1012 aa11.96□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gm5565A0A0G2JGB2 317 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tas2r122D3YU55 309 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Herc6F2Z461 1003 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slc2a3P32037 493 aaKnown RBP11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pi4k2aQ2TBE6 479 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Syn2Q64332 586 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Psd4Q8BLR5 1005 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 SncaipQ99ME3 962 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Il22bQ9JJY8 179 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Wnt8bQ9WUD6 350 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Trim10Q9WUH5 489 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mapk11Q9WUI1 364 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm3476K7N6V0 257 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fam71e2L7N480 754 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm17174M0QWQ9 212 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 OsmrO70458 971 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 CntfP51642 198 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Nkx2-3P97334 362 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Dennd1bQ3U1T9 766 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Sez6lQ6P1D5 963 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ero1bQ8R2E9 467 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zfp709Q8VC29 727 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 SelenosQ9BCZ4 190 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 EcdQ9CS74 641 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zcchc12Q9CZA5 402 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 TesminQ9WTJ6 475 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr1040A2ARY1 313 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm5814J3QP80 125 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 DldO08749 509 aaKnown RBP11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 UqcrhP99028 89 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 A630001G21RikQ3UTB2 229 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gja3Q64448 417 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slc39a11Q8BWY7 342 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 TrhdeQ8K093 1025 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Nle1Q8VEJ4 485 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 GcshQ91WK5 170 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slco1a5Q91YY5 670 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ecrg4Q99LS0 148 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Usp26Q99MX1 835 aa11.96□□□□□ -0.5
Trim56-201ENSMUST00000054384 Thnsl2Q80W22 483 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zcchc4Q8BKW4 512 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Trmt2aQ8BNV1 574 aaKnown RBP11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ift80Q8K057 777 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Epn3Q91W69 636 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zdhhc6Q9CPV7 413 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 9230104L09RikQ9D264 133 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Nudt2P56380 147 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zc3h11aQ6NZF1 792 aaKnown RBP11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Q6PAC4 1279 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Prl7b1Q8CGZ9 251 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Xpr1Q9Z0U0 695 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tbc1d16A2ABG4 766 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm16506F7ANP4 213 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Hmx1O70218 332 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 PlaaP27612 794 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rab26Q504M8 260 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr20Q7TRX9 314 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gpr150Q8BL07 427 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fam46bQ8C152 427 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 NumbQ9QZS3 653 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Znfx1Q8R151 1909 aaKnown RBP11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mup18A2BIM8 181 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gpr137cE9Q343 423 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gosr2O35166 212 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mup11P04938 181 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cbx3P23198 183 aaKnown RBP11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Polr1dP97304 133 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm21320Q4FZE8 181 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Il18r1Q61098 537 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Acsf2Q8VCW8 615 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 PigxQ99LV7 254 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Efcab9Q9DAM2 216 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms