RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Mup13L7N222 235 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 NrlP54846 237 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gpsm3Q3U1Z5 159 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm21627Q810R0 219 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Acbd7Q9D258 88 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 GabrqQ9JLF1 638 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Sept5Q9Z2Q6 369 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Znf382B2RXC5 579 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Zar1lC3VD30 291 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Celf5D3Z4T1 395 aaKnown RBP10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vmn2r120E9PX34 856 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Fbxl18E9PYR1 771 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Sptlc1O35704 473 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PomkQ3TUA9 349 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PoliQ6R3M4 717 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm4922Q8C0N0 497 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Wdr37Q8CBE3 496 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Unc93b1Q8VCW4 598 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Exosc4Q921I9 245 aaKnown RBP10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PigqQ9QYT7 581 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ptges3Q9R0Q7 160 aaKnown RBP10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Map3k6Q9WTR2 1291 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Sult2a6B2RVI8 285 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cldn24D3YXJ9 220 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 D3Z070 196 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vmn2r73D3Z7M3 851 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Kpna6O35345 536 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Igf2bp1O88477 577 aaKnown RBP10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pi4k2aQ2TBE6 479 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm45902Q3UDN3 361 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pak6Q3ULB5 682 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slc22a16Q497L8 649 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Olfr23Q7TRX4 325 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Usp45Q8K387 813 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slc35f5Q8R314 524 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pcdhb8Q91XZ2 779 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pramel1Q99MW3 458 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Q9CQC3 228 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tchhl1Q9D3P1 638 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ddi1Q9DAF3 408 aa10.16□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Zmynd12A2BGJ5 363 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cyp2c69E9PXC3 491 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slc6a2O55192 617 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 MndaP0DOV1 425 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 FshrP35378 692 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 B3gat3P58158 335 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Awat2Q6E1M8 333 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Syt16Q7TN83 639 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 MtdhQ80WJ7 579 aaKnown RBP10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Atl1Q8BH66 558 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pnma2Q8BHK0 365 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 FlcnQ8QZS3 579 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Myoz3Q8R4E4 245 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slc5a2Q923I7 670 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gadd45gip1Q9CR59 222 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cab39lQ9DB16 337 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ampd2Q9DBT5 798 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tceal7A3KGA4 98 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Serpina3gQ5I2A0 440 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Fstl1Q62356 306 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cyp2r1Q6VVW9 501 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Trit1Q80UN9 467 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Kank2Q8BX02 843 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 TpbglQ8C013 384 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pcdhgc3Q91XX1 934 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rpl38Q9JJI8 70 aaKnown RBP10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 EmcnQ9R0H2 261 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mdc1Q5PSV9 1707 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vmn2r27D3YUK6 857 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mkln1O89050 735 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Il3P01586 166 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 FynP39688 537 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cyp2c67Q569X9 491 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 OgdhQ60597 1023 aaKnown RBP10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Grik5Q61626 979 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Serpina3aQ6P4P1 422 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Amigo1Q80ZD8 492 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ipo13Q8K0C1 963 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ddx50Q99MJ9 734 aaKnown RBP10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slc22a4Q9Z306 553 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cntnap5cQ0V8T7 1305 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Adgra3Q7TT36 1310 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Flvcr1B2RXV4 560 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ube2e3P52483 207 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pla2g6P97819 807 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tmem121Q80XA0 318 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ptpn7Q8BUM3 359 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 B3gnt7Q8K0J2 397 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tmem17Q8K0U3 198 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Zcchc9Q8R1J3 271 aaKnown RBP10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pcdhga10Q91XY9 930 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Nif3l1Q9EQ80 376 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PdynO35417 248 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 BtrcQ3ULA2 605 aaKnown RBP10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Sema3cQ62181 751 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 RgnQ64374 299 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slc44a3Q921V7 656 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 KlbQ99N32 1043 aa10.15□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm3259D3YUK0 475 aa10.15□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc28a1E9PXX9 648 aa10.15□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms