RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Sh3kbp1Q8R550 709 aaKnown RBP20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Atp6v1b1Q91YH6 513 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Tbc1d21Q9D9D3 336 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Nhsl2B1AXH1 854 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gm44G3UW88 330 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gm14496K7N5U4 849 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 AmacrO09174 381 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Neu1O35657 409 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Fmo3P97501 534 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Ppp1r15bQ8BFW3 697 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 SybuQ8BHS8 665 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gtf3c4Q8BMQ2 817 aaKnown RBP20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Nlrp10Q8CCN1 673 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Snx8Q8CFD4 459 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Snx15Q91WE1 337 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Cog2Q921L5 731 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Pgam1Q9DBJ1 254 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Ing2Q9ESK4 281 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Sh3glb1Q9JK48 365 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 PrebQ9WUQ2 417 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Vsig10l2A0A140LHF2 776 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Olfr1160A2AVT0 319 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Klc2O88448 599 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 DesP31001 469 aaKnown RBP20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Fitm2P59266 262 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Zbtb16Q3UQ17 673 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Adrbk2Q3UYH7 688 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Igfbp7Q61581 281 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Fam181bQ80VF6 417 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Pdk1Q8BFP9 434 aaKnown RBP20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Grsf1Q8C5Q4 479 aaKnown RBP20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 BsndQ8VIM4 307 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Lpin1Q91ZP3 924 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Dhrs7bQ99J47 323 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 Znrf4Q9DAH2 327 aa20.43■□□□□ 0.86
Trim47-201ENSMUST00000021120 4930469K13RikA0A286YDB2 92 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Serpinb3cA2RSF9 386 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Syngr1O55100 234 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 ZfrO88532 1074 aaKnown RBP20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Atxn10P28658 475 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Elk4P41158 430 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Epb41P48193 858 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Fam117bQ3U3E2 584 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Catsper3Q80W99 395 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 CcnyQ8BGU5 341 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Atp6v1g3Q8BMC1 118 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 NonoQ99K48 473 aaKnown RBP20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Cyp4f13Q99N19 523 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 NwcQ9CQI4 244 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 ProzQ9CQW3 399 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 PlgrktQ9D3P8 147 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gpc1Q9QZF2 557 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Kat6aQ8BZ21 2003 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gm11758A2BEI6 360 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gm11757A2BEI8 360 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Aldoart1A6ZI46 419 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Dnmt3bO88509 859 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Htr2cP34968 459 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Mcm9Q2KHI9 1134 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Ak8Q32M07 479 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Baiap2l2Q80Y61 522 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Ofcc1Q8BGX4 166 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Nup93Q8BJ71 819 aaKnown RBP20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Mpp7Q8BVD5 576 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Tspan33Q8R3S2 283 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Smim14Q91VT8 99 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Adcy4Q91WF3 1077 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Pcdha1Q91Y21 948 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Krt20Q9D312 431 aa20.42■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gm21731A0A286YDE9 180 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Mkrn2osD3Z393 217 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 1700024B05RikE9Q6D7 167 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 BC024978J3QPC3 361 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Sdc4O35988 198 aaKnown RBP20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 PargO88622 969 aaKnown RBP20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Usp2O88623 613 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Coro1aO89053 461 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Dnmt3cP0DOY1 709 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Ccl5P30882 91 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 CenpcP49452 906 aaKnown RBP20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Psma2P49722 234 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 ThraP63058 492 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Psmb4P99026 264 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Trappc9Q3U0M1 1148 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Lsmem1Q3UQS2 128 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 MlipQ5FW52 269 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 ScinQ60604 715 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Nomo1Q6GQT9 1214 aaKnown RBP20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Plekhs1Q8BW88 474 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Asb14Q8C6Y6 587 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 ItchQ8C863 864 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Lancl3Q8CD19 420 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Atg14Q8CDJ3 492 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Ddx18Q8K363 660 aaKnown RBP20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Rprd1aQ8VDS4 312 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Krcc1Q99JT5 256 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Q9D1F3 157 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Prl5a1Q9JII2 230 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Tcp10cE9Q046 482 aa20.41■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gm5689F6Y2A6 97 aa20.41■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms