RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 StyxQ60969 223 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Arl13bQ640N2 427 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Sema4cQ64151 834 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 SyncripQ7TMK9 623 aaKnown RBP14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Dhx33Q80VY9 698 aaKnown RBP14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Atp2c1Q80XR2 918 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Rufy1Q8BIJ7 712 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Cwf19l1Q8CI33 537 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Sirt3Q8R104 334 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Smyd2Q8R5A0 433 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Bag2Q91YN9 210 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Mccc1Q99MR8 717 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Serbp1Q9CY58 407 aaKnown RBP14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Ankrd7Q9D504 279 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Calr3Q9D9Q6 380 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Glipr1l1Q9DAG6 236 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Plscr3Q9JIZ9 296 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Nr4a3Q9QZB6 627 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Coro1bQ9WUM3 484 aaKnown RBP14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Coro1cQ9WUM4 474 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Jbts17Q8CE72 3214 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 D3Ertd254eA0A0G2JEM5 796 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Mroh7A2AVR2 1279 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 SelenovD3YXG1 328 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Vmn2r118E9Q1C1 853 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Tekt5G5E8A8 557 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Spin2fJ3QPU0 254 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Smad6O35182 495 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Ccr7P47774 378 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Htr4P97288 388 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Wbp1P97764 304 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Rrp36Q3UFY0 244 aaKnown RBP14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Snx21Q3UR97 363 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Nr1d1Q3UV55 615 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Prkaa1Q5EG47 559 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Casc4Q6P2L7 435 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Mtmr12Q80TA6 747 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Ankzf1Q80UU1 748 aaKnown RBP14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Lrrc19Q8BZT5 364 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Sphk1Q8CI15 382 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 MgarpQ8VI64 283 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 L2hgdhQ91YP0 464 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 PinlypQ9CQD7 212 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Agpat3Q9D517 376 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 1700069L16RikQ9D9H5 109 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Thap11Q9JJD0 305 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Grm3Q9QYS2 879 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Cyp2g1Q9WV19 494 aa14.73□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Tnfrsf14A0A1W2P7D5 276 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Cldn34b1B1AZQ8 209 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Vmn2r85G3UW56 850 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Gm10715J3QP74 227 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Olfr611K7N609 323 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Olfr612L7N462 323 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Mmp13P33435 472 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Rps14P62264 151 aaKnown RBP14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Ezh1P70351 747 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Anp32eP97822 260 aaKnown RBP14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Birc2Q62210 612 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Tpgs2Q66JT5 296 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Olfr533Q7TRT7 320 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Hus1Q8BQY8 280 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Gpr21Q8BX79 349 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Slc39a13Q8BZH0 361 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Fmo9Q8C116 539 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Rfx6Q8C7R7 927 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 P3h4Q8K2B0 443 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Ndc80Q9D0F1 642 aaKnown RBP14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 S100pbpQ9D5K4 396 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Nsmce1Q9D720 266 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Ten1Q9D7K2 161 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Cldn34b2Q9D9N2 209 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Gria3Q9Z2W9 888 aa14.72□□□□□ -0.05
Ercc1-201ENSMUST00000003645 A0A1L1STL9 112 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Catsperg2C6KI89 1145 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Exoc3l2D3YUP5 789 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 MlxO08609 298 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 PtgdsO09114 189 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 H2-M9O19442 342 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Clcn6O35454 870 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Opn1mwO35599 359 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Dync1i1O88485 628 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 CtslP06797 334 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Klkb1P26262 638 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Scg3P47867 471 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Polr3bP59470 1133 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Mkl2P59759 1080 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Tex35Q14BK3 207 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Abl2Q4JIM5 1182 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Lrrc8bQ5DU41 803 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Nab1Q61122 486 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Ccdc181Q80ZU5 509 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Zfyve1Q810J8 777 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 FicdQ8BIX9 458 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Cgrrf1Q8BMJ7 332 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Defb22Q8BVC1 179 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Olfr615Q8VGY4 313 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 HnrnpllQ921F4 591 aaKnown RBP14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Alg1Q921Q3 482 aa14.71□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Cdc26Q99JP4 85 aa14.71□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms