RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 NAPRTQ6XQN6 538 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 HERC6Q8IVU3 1022 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 MCOLN2Q8IZK6 566 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 LSMEM1Q8N8F7 131 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 LNX1Q8TBB1 728 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-227ENST00000640648 HDAC2Q92769 488 aaKnown RBP8.29□□□□□ -1.08
NECAP1-227ENST00000640648 ZNF578Q96N58 590 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-227ENST00000640648 IL1RL2Q9HB29 575 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.29□□□□□ -1.08
NECAP1-227ENST00000640648 PLEKHA6Q9Y2H5 1048 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 RIMS1Q86UR5 1692 aaKnown RBP8.29□□□□□ -1.08
NECAP1-227ENST00000640648 AGLP35573 1532 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 FAM237BA0A1B0GVD1 139 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 RAB2AP61019 212 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 RBP5P82980 135 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 CYP24A1Q07973 514 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 PTP4A2Q12974 167 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 COTL1Q14019 142 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 SEMA3AQ14563 771 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 LRRC66Q68CR7 880 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 MFSD7Q6UXD7 560 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 DPY19L3Q6ZPD9 716 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 MIER2Q8N344 545 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 OR5J2Q8NH18 312 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 ITFG1Q8TB96 612 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 MAGEE2Q8TD90 523 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-227ENST00000640648 FIG4Q92562 907 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 NT5C1AQ9BXI3 368 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 SALL4Q9UJQ4 1053 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 DNPEPQ9ULA0 475 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 SOAT2O75908 522 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 BPGMP07738 259 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 NCAM1P13591 858 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 ITGA2P17301 1181 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 XRCC1P18887 633 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-227ENST00000640648 ATP6V1B2P21281 511 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 NR4A1P22736 598 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 RARRES1P49788 294 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 HLCSP50747 726 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 PPP3CAQ08209 521 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 LRP8Q14114 963 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 PDK2Q15119 407 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 AMHR2Q16671 573 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 AGKQ53H12 422 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 DCAF6Q58WW2 860 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 BRMS1LQ5PSV4 323 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 CREB3L2Q70SY1 520 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 BRSK2Q8IWQ3 736 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 ASB15Q8WXK1 588 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 GAREM1Q9H706 876 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 NIPAL2Q9H841 368 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 SCPEP1Q9HB40 452 aa8.29□□□□□ -1.08
NECAP1-227ENST00000640648 CNTNAP4Q9C0A0 1308 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 TRAPPC13A5PLN9 417 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 AIREO43918 545 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 SERPINF2P08697 491 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 FDX1P10109 184 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 TCEA1P23193 301 aaKnown RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 DNAJB1P25685 340 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 NEK3P51956 506 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 BTG3Q14201 252 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 MXD4Q14582 209 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 ZNF267Q14586 743 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 CDC73Q6P1J9 531 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 HAGHLQ6PII5 290 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 SLFN11Q7Z7L1 901 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 IFT43Q96FT9 208 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 MED15Q96RN5 788 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 FGFBP2Q9BYJ0 223 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 GPN2Q9H9Y4 310 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 PPP4R1LQ9P1A2 415 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 CYTH4Q9UIA0 394 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 VPS9D1Q9Y2B5 631 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 POLR3HQ9Y535 204 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 A0A1B0GVG6 124 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 ACOX3O15254 700 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 INPP4BO15327 924 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 CPNE3O75131 537 aaKnown RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 PIK3CBP42338 1070 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 RPP38P78345 283 aaKnown RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 PGS1Q32NB8 556 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 ISLR2Q6UXK2 745 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 OTOP1Q7RTM1 612 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 NOXA1Q86UR1 476 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 TMEM199Q8N511 208 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 PRELID2Q8N945 189 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 ZNF540Q8NDQ6 660 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 NKX2-3Q8TAU0 364 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 AURKBQ96GD4 344 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 GLT1D1Q96MS3 346 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 SPON2Q9BUD6 331 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 USP29Q9HBJ7 922 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 STUB1Q9UNE7 303 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 TNS2Q63HR2 1409 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 RAB19A4D1S5 217 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 C3orf70A6NLC5 250 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-227ENST00000640648 PRR5-ARHGAP8B1AHC4 643 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 SBK2P0C263 348 aa8.28□□□□□ -1.08
NECAP1-227ENST00000640648 S100PP25815 95 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms