RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 PARGQ86W56 976 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 TMPRSS12Q86WS5 348 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 PLA2G15Q8NCC3 412 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 SMIM14Q96QK8 99 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 CPEB1Q9BZB8 566 aaKnown RBP16.52■□□□□ 0.24
COLCA2-206ENST00000638573 CLPBQ9H078 707 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 HAUS2Q9NVX0 235 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 SEPT3Q9UH03 358 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 LHX6Q9UPM6 363 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 GPSM3Q9Y4H4 160 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 OR1A2Q9Y585 309 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 PCDHB1Q9Y5F3 818 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 HEY1Q9Y5J3 304 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 APC2O95996 2303 aa16.52■□□□□ 0.23
COLCA2-206ENST00000638573 SHROOM3Q8TF72 1996 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 ZFYVE26Q68DK2 2539 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 RIOK3O14730 519 aaKnown RBP16.51■□□□□ 0.23
COLCA2-206ENST00000638573 PPP1R12AO14974 1030 aaPredicted RBP16.51■□□□□ 0.23
COLCA2-206ENST00000638573 PCCBP05166 539 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 GM2AP17900 193 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 TGM2P21980 687 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 LIG3P49916 1009 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 RENBPP51606 427 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 MAXP61244 160 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 GBE1Q04446 702 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 LBRQ14739 615 aaKnown RBP16.51■□□□□ 0.23
COLCA2-206ENST00000638573 CDKN3Q16667 212 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 CCDC181Q5TID7 509 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 GUSBP11Q6P575 273 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 PLD5Q8N7P1 536 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 CCNYQ8ND76 341 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 TRIM58Q8NG06 486 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 TSACCQ96A04 125 aaPredicted RBP16.51■□□□□ 0.23
COLCA2-206ENST00000638573 LRRC61Q9BV99 259 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 KCNF1Q9H3M0 494 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 CELSR3Q9NYQ7 3312 aa16.51■□□□□ 0.23
COLCA2-206ENST00000638573 hCG_1818297A0A087WSY0 165 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 TLX3O43711 291 aaPredicted RBP16.5■□□□□ 0.23
COLCA2-206ENST00000638573 MAFKO60675 156 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 CST8O60676 142 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 KRT10P13645 584 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 XPAP23025 273 aaPredicted RBP16.5■□□□□ 0.23
COLCA2-206ENST00000638573 HSPA9P38646 679 aaKnown RBP16.5■□□□□ 0.23
COLCA2-206ENST00000638573 MMP12P39900 470 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 NR2C2P49116 596 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 SCNN1BP51168 640 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 HNRNPKP61978 463 aaKnown RBP eCLIP16.5■□□□□ 0.23
COLCA2-206ENST00000638573 PDK1Q15118 436 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 TAZQ16635 292 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 PRRT3Q5FWE3 981 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 MARC1Q5VT66 337 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 SFTPA2Q8IWL1 248 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 PHACTR4Q8IZ21 702 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 PDCD7Q8N8D1 485 aaKnown RBP16.5■□□□□ 0.23
COLCA2-206ENST00000638573 DENND6BQ8NEG7 585 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 ASB12Q8WXK4 309 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 HDAC11Q96DB2 347 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 DCBLD2Q96PD2 775 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 NLGN3Q9NZ94 848 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 DTLQ9NZJ0 730 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 APOBEC3BQ9UH17 382 aaKnown RBP16.5■□□□□ 0.23
COLCA2-206ENST00000638573 PACSIN2Q9UNF0 486 aaPredicted RBP16.5■□□□□ 0.23
COLCA2-206ENST00000638573 ATP8A1Q9Y2Q0 1164 aa16.5■□□□□ 0.23
COLCA2-206ENST00000638573 TDRD6O60522 2096 aaKnown RBP16.5■□□□□ 0.23
COLCA2-206ENST00000638573 CPED1A4D0V7 1026 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 PMS2P1A4D2B8 440 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 TRAFD1O14545 582 aaPredicted RBP16.49■□□□□ 0.23
COLCA2-206ENST00000638573 AQP9O43315 295 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 OPA1O60313 960 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 CKMT1AP12532 417 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 CCNCP24863 283 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 THOP1P52888 689 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 IHHQ14623 411 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 INPP5AQ14642 412 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 GRM3Q14832 879 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 LLGL1Q15334 1064 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 ALG11Q2TAA5 492 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 PERM1Q5SV97 790 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.49■□□□□ 0.23
COLCA2-206ENST00000638573 P3H4Q92791 437 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 IFT43Q96FT9 208 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 BRD8Q9H0E9 1235 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 PCDHGC4Q9Y5F7 938 aa16.49■□□□□ 0.23
COLCA2-206ENST00000638573 MT-CO3P00414 261 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 C1SP09871 688 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 TSHRP16473 764 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 ITPKBP27987 946 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 PTPN7P35236 360 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 MMP13P45452 471 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 PEX5P50542 639 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 LRRC14Q15048 493 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 CFAP58Q5T655 872 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 SEL1L2Q5TEA6 688 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 FAXCQ5TGI0 409 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 NPNTQ6UXI9 565 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 RD3Q7Z3Z2 195 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 DCP2Q8IU60 420 aaKnown RBP16.48■□□□□ 0.23
COLCA2-206ENST00000638573 HID1Q8IV36 788 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 SLC35F3Q8IY50 421 aa16.48■□□□□ 0.23
COLCA2-206ENST00000638573 CCDC13Q8IYE1 715 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms