RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 VEGFBP49765 207 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 ZNF549Q6P9A3 640 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 STON2Q8WXE9 905 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 MYRFLQ96LU7 910 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 CCDC28BQ9BUN5 200 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 ALG9Q9H6U8 611 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 CATSPERZQ9NTU4 200 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 TANC1Q9C0D5 1861 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 CBX4O00257 560 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 SNUPNO95149 360 aaKnown RBP21.56■■□□□ 1.04
CLN6-224ENST00000638076 ELF1P32519 619 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 VHLP40337 213 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 ALDH1A3P47895 512 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 EPHB1P54762 984 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 SPOUT1Q5T280 376 aaKnown RBP21.56■■□□□ 1.04
CLN6-224ENST00000638076 ADGRF1Q5T601 910 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 TMEM198Q66K66 360 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 RPS27LQ71UM5 84 aaKnown RBP21.56■■□□□ 1.04
CLN6-224ENST00000638076 MYLK4Q86YV6 388 aaPredicted RBP21.56■■□□□ 1.04
CLN6-224ENST00000638076 OR4L1Q8NH43 312 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 RMDN1Q96DB5 314 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 NAF1Q96HR8 494 aaKnown RBP21.56■■□□□ 1.04
CLN6-224ENST00000638076 CATSPER2Q96P56 530 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 RTKNQ9BST9 563 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 CDH22Q9UJ99 828 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 YIPF1Q9Y548 306 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 WASF2Q9Y6W5 498 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 A0A1B0GVM2 712 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 TCAF2A6NFQ2 919 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 SOD2P04179 222 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 FDXRP22570 491 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 PPARGP37231 505 aaPredicted RBP21.55■■□□□ 1.04
CLN6-224ENST00000638076 SLC26A3P40879 764 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 LRRC74BQ6ZQY2 392 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 CHST9Q7L1S5 443 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 SETD3Q86TU7 594 aaPredicted RBP21.55■■□□□ 1.04
CLN6-224ENST00000638076 RIMKLBQ9ULI2 386 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 SPO11Q9Y5K1 396 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 CCNT2O60583 730 aaKnown RBP21.55■■□□□ 1.04
CLN6-224ENST00000638076 PDE5AO76074 875 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 PARNO95453 639 aaKnown RBP21.55■■□□□ 1.04
CLN6-224ENST00000638076 CR2P20023 1033 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 KCNC1P48547 511 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 IKBKEQ14164 716 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 RFTN1Q14699 578 aaPredicted RBP21.55■■□□□ 1.04
CLN6-224ENST00000638076 PPM1LQ5SGD2 360 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 PGM2L1Q6PCE3 622 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 ANKRD33Q7Z3H0 272 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 ISCA2Q86U28 154 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 CPSF7Q8N684 471 aaKnown RBP21.55■■□□□ 1.04
CLN6-224ENST00000638076 CDKN2AIPNLQ96HQ2 116 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 ZNF385DQ9H6B1 395 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 SCUBE2Q9NQ36 999 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 NMRK1Q9NWW6 199 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 FIS1Q9Y3D6 152 aa21.55■■□□□ 1.04
CLN6-224ENST00000638076 RGSL1A5PLK6 1076 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 TRPC5OSA6NMA1 111 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 SORBS2O94875 1100 aaKnown RBP21.54■■□□□ 1.04
CLN6-224ENST00000638076 CRTAMO95727 393 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 THRAP10827 490 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 TIAL1Q01085 375 aaKnown RBP eCLIP21.54■■□□□ 1.04
CLN6-224ENST00000638076 BTKQ06187 659 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 SULT2A1Q06520 285 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 CYTH1Q15438 398 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 SLC22A9Q8IVM8 553 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 KLF16Q9BXK1 252 aaPredicted RBP21.54■■□□□ 1.04
CLN6-224ENST00000638076 MUC3BQ9H195 1237 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 HSFX1Q9UBD0 423 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 OGDHLQ9ULD0 1010 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 MICAL3Q7RTP6 2002 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 PRSS56P0CW18 603 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 OGNP20774 298 aaKnown RBP21.54■■□□□ 1.04
CLN6-224ENST00000638076 SP100P23497 879 aaPredicted RBP21.54■■□□□ 1.04
CLN6-224ENST00000638076 PMLP29590 882 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 STC1P52823 247 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 TBL3Q12788 808 aaKnown RBP21.54■■□□□ 1.04
CLN6-224ENST00000638076 MUM1Q2TAK8 710 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 RNF219Q5W0B1 726 aaPredicted RBP21.54■■□□□ 1.04
CLN6-224ENST00000638076 TPGS2Q68CL5 300 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 SDCCAG8Q86SQ7 713 aaPredicted RBP21.54■■□□□ 1.04
CLN6-224ENST00000638076 SNX32Q86XE0 403 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 MARK4Q96L34 752 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 RNF208Q9H0X6 261 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 EML4Q9HC35 981 aaKnown RBP21.54■■□□□ 1.04
CLN6-224ENST00000638076 SMPD4Q9NXE4 827 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 CORO1CQ9ULV4 474 aaPredicted RBP21.54■■□□□ 1.04
CLN6-224ENST00000638076 TBC1D30Q9Y2I9 924 aa21.54■■□□□ 1.04
CLN6-224ENST00000638076 NVLO15381 856 aaKnown RBP21.53■■□□□ 1.04
CLN6-224ENST00000638076 ZNF140P52738 457 aaPredicted RBP21.53■■□□□ 1.04
CLN6-224ENST00000638076 SLC39A5Q6ZMH5 540 aa21.53■■□□□ 1.04
CLN6-224ENST00000638076 GLT6D1Q7Z4J2 308 aa21.53■■□□□ 1.04
CLN6-224ENST00000638076 MDGA1Q8NFP4 955 aa21.53■■□□□ 1.04
CLN6-224ENST00000638076 DNAJC9Q8WXX5 260 aa21.53■■□□□ 1.04
CLN6-224ENST00000638076 MAELQ96JY0 434 aaKnown RBP21.53■■□□□ 1.04
CLN6-224ENST00000638076 TDRD1Q9BXT4 1180 aaKnown RBP21.53■■□□□ 1.04
CLN6-224ENST00000638076 NLE1Q9NVX2 485 aaPredicted RBP21.53■■□□□ 1.04
CLN6-224ENST00000638076 ARIH1Q9Y4X5 557 aaPredicted RBP21.53■■□□□ 1.04
CLN6-224ENST00000638076 SDHDO14521 159 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 SKAP2O75563 359 aaPredicted RBP21.52■■□□□ 1.04
CLN6-224ENST00000638076 PRLP01236 227 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms