RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	PCSK7	Q16549	785 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	DGUOK	Q16854	277 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	ZNF181	Q2M3W8	571 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC10A6	Q3KNW5	377 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	DENND1B	Q6P3S1	775 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	SPRED1	Q7Z699	444 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	LINC00523	Q86TU6	105 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	UNC5B	Q8IZJ1	945 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	FAM109A	Q8N4B1	249 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	PHF10	Q8WUB8	498 aa	Known RBP	10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	LRRC39	Q96DD0	335 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	CSF3R	Q99062	836 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	NT5C1A	Q9BXI3	368 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	GON7	Q9BXV9	100 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	AP5M1	Q9H0R1	490 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	NOL11	Q9H8H0	719 aa	Known RBP	10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	COG4	Q9H9E3	785 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	TCF7L2	Q9NQB0	619 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	MRGBP	Q9NV56	204 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	IFT80	Q9P2H3	777 aa	Predicted RBP	10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306		M0QYV0	167 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	UGT2B11	O75310	529 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	NADK	O95544	446 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	IQCF3	P0C7M6	154 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	SMIM10L2A	P0DMW4	78 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	SMIM10L2B	P0DMW5	78 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	IL4R	P24394	825 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	PNPLA4	P41247	253 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	MORN1	Q5T089	497 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	UBE2U	Q5VVX9	321 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	NEK5	Q6P3R8	708 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	UNC5A	Q6ZN44	842 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	USP51	Q70EK9	711 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	TLK2	Q86UE8	772 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	CDR2L	Q86X02	465 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	KIAA0319L	Q8IZA0	1049 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	SCML4	Q8N228	414 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	DHRSX	Q8N5I4	330 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	TDRD5	Q8NAT2	981 aa	Known RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	LEMD2	Q8NC56	503 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	TFAP2B	Q92481	460 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	USP13	Q92995	863 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	FKBP10	Q96AY3	582 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	HDAC11	Q96DB2	347 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	UNC93B1	Q9H1C4	597 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	ASNSD1	Q9NWL6	643 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	SARDH	Q9UL12	918 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	EMCN	Q9ULC0	261 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	CAB39	Q9Y376	341 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	TCRBV7S3A2	A0A539	114 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	MBLAC1	A4D2B0	266 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	FAM159B	A6NKW6	160 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	C16orf96	A6NNT2	1141 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306		H0YAE9	185 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	KPNA6	O60684	536 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	DAB1	O75553	588 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	CCNK	O75909	580 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	DDHD2	O94830	711 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	MICAL2	O94851	1124 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	CSPG5	O95196	566 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	KCNH1	O95259	989 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	RASAL1	O95294	804 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	CD4	P01730	458 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	RPLP2	P05387	115 aa	Known RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	BMP4	P12644	408 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	PTGS2	P35354	604 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	SERPINB5	P36952	375 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	ARL1	P40616	181 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	DPP6	P42658	865 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	CDKN2B	P42772	138 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	RAP1GAP	P47736	663 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	ARCN1	P48444	511 aa	Known RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	PSME3	P61289	254 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	B2M	P61769	119 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	DPYSL3	Q14195	570 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	KCNJ11	Q14654	390 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	MFSD10	Q14728	455 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	CBX2	Q14781	532 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	PCLAF	Q15004	111 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	TAF1C	Q15572	869 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	PTPN20	Q4JDL3	420 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	C2CD6	Q53TS8	623 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	RBM48	Q5RL73	367 aa	Known RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	MARCH8	Q5T0T0	291 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	ZNF544	Q6NX49	715 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	CRTC3	Q6UUV7	619 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	CYS1	Q717R9	158 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	UNC93A	Q86WB7	457 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	TMEM192	Q8IY95	271 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	NPLOC4	Q8TAT6	608 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	ZFP90	Q8TF47	636 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC39A13	Q96H72	371 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	DEPDC7	Q96QD5	511 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	APBA2	Q99767	749 aa		10.8	□□□□□ -0.68

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