RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 TMC8Q8IU68 726 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 VRK3Q8IV63 474 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 REPS1Q96D71 796 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 PERPQ96FX8 193 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 MXD3Q9BW11 206 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 HEMGNQ9BXL5 484 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 ACTR5Q9H9F9 607 aaPredicted RBP5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 CPNE5Q9HCH3 593 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 NLKQ9UBE8 527 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 CARD8Q9Y2G2 431 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 DLEC1Q9Y238 1755 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 RTL1A6NKG5 1358 aa5.26□□□□□ -1.57
TRAPPC9-216ENST00000634178 EDC4Q6P2E9 1401 aaKnown RBP5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 RGPD2P0DJD1 1756 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 NDUFS3O75489 264 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 PLAUP00749 431 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 ST6GAL1P15907 406 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 TMEM11P17152 192 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 TNFRSF1AP19438 455 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 CDAP32320 146 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 ACSL1P33121 698 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 IFI35P80217 286 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 RAB41Q5JT25 222 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 TSSK4Q6SA08 328 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 MOB3CQ70IA8 216 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 CHST9Q7L1S5 443 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 TFAP2DQ7Z6R9 452 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 GGNQ86UU5 652 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 FAM185AQ8N0U4 392 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 CCDC191Q8NCU4 936 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 WIPF2Q8TF74 440 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 HIPK3Q9H422 1215 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 SLC35C2Q9NQQ7 365 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 SPATS2LQ9NUQ6 558 aaKnown RBP5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 SUCLA2Q9P2R7 463 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 NOL7Q9UMY1 257 aaKnown RBP5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 CAPN7Q9Y6W3 813 aa5.25□□□□□ -1.57
TRAPPC9-216ENST00000634178 AOX1Q06278 1338 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 COL5A3P25940 1745 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 C17orf102A2RUQ5 167 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 FAM157AC9JC47 383 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 CCER2I3L3R5 266 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 RRHO14718 337 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 RNMTO43148 476 aaKnown RBP5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 LIASO43766 372 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 APOA4P06727 396 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 CLTBP09497 229 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 KRT10P13645 584 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 IL11P20809 199 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 KLRC2P26717 231 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 GPR12P47775 334 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 CLCNKBP51801 687 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 MRPL12P52815 198 aaKnown RBP5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 LRMPQ12912 555 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 RNPS1Q15287 305 aaKnown RBP5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 NTRK2Q16620 822 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 ME3Q16798 604 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 SPECC1Q5M775 1068 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 AAGABQ6PD74 315 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 DBX2Q6ZNG2 339 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 TMEM217Q8N7C4 229 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 ZNF398Q8TD17 642 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 NEU4Q8WWR8 484 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 PSPC1Q8WXF1 523 aaKnown RBP5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 OTULINQ96BN8 352 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 CLMNQ96JQ2 1002 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 MRPL15Q9P015 296 aaKnown RBP5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 PACSIN3Q9UKS6 424 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 MKLN1Q9UL63 735 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 AAR2Q9Y312 384 aaKnown RBP5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 FAM96BQ9Y3D0 163 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 ADAM18Q9Y3Q7 739 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 ADAMTSL1Q8N6G6 1762 aa5.24□□□□□ -1.57
TRAPPC9-216ENST00000634178 NRXN2Q9P2S2 1712 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 A0A096LPK6 155 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 A0A1W2PQ09 198 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 FAM170AA1A519 330 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 TARSL2A2RTX5 802 aaKnown RBP5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 CXorf65A6NEN9 183 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 A8MZ25 164 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 EBAG9O00559 213 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 SLC25A12O75746 678 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 TMCC1O94876 653 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 SEC31AO94979 1220 aaKnown RBP5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 CSPG5O95196 566 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 MT-CYBP00156 380 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 TFP02787 698 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 TUBB4AP04350 444 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 RB1P06400 928 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 PRR35P0CG20 571 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 HOXC9P31274 260 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 UBA7P41226 1012 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 GARSP41250 739 aaKnown RBP5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 PIP4K2AP48426 406 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 CENPAP49450 140 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 TFAP4Q01664 338 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 RUNX2Q13950 521 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 RASA2Q15283 850 aa5.23□□□□□ -1.57
TRAPPC9-216ENST00000634178 ZSCAN23Q3MJ62 389 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms