RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 HDAC10Q969S8 669 aa10.05□□□□□ -0.8
TCF4-254ENST00000626584 SPATA16Q9BXB7 569 aa10.05□□□□□ -0.8
TCF4-254ENST00000626584 RETREG1Q9H6L5 497 aa10.05□□□□□ -0.8
TCF4-254ENST00000626584 TNFRSF12AQ9NP84 129 aa10.05□□□□□ -0.8
TCF4-254ENST00000626584 ABI2Q9NYB9 513 aaPredicted RBP10.05□□□□□ -0.8
TCF4-254ENST00000626584 GMIPQ9P107 970 aa10.05□□□□□ -0.8
TCF4-254ENST00000626584 NUDT5Q9UKK9 219 aa10.05□□□□□ -0.8
TCF4-254ENST00000626584 PACSIN3Q9UKS6 424 aa10.05□□□□□ -0.8
TCF4-254ENST00000626584 TRAF6Q9Y4K3 522 aa10.05□□□□□ -0.8
TCF4-254ENST00000626584 PCDHB5Q9Y5E4 795 aa10.05□□□□□ -0.8
TCF4-254ENST00000626584 C15orf38-AP3S2A0A0A6YYH1 394 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 SMIM31A0A1B0GVY4 71 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 FBP2O00757 339 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 SYN3O14994 580 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 B4GALT3O60512 393 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 RTN3O95197 1032 aaPredicted RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 ASGR1P07306 291 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 SNRPB2P08579 225 aaKnown RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 FGF4P08620 206 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 ARSDP51689 593 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 C1QTNF8P60827 252 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 PRAMEP78395 509 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 FAM189BP81408 668 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 RING1Q06587 406 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 ITKQ08881 620 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 FASTKQ14296 549 aaKnown RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 TLR1Q15399 786 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 GLB1LQ6UWU2 654 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 LARP4Q71RC2 724 aaKnown RBP eCLIP10.04□□□□□ -0.8
TCF4-254ENST00000626584 ARPINQ7Z6K5 226 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 ISCA2Q86U28 154 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 AHI1Q8N157 1196 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 TRIB2Q92519 343 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 IGSF8Q969P0 613 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 PSMG2Q969U7 264 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 KLHL32Q96NJ5 620 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 ZNF599Q96NL3 588 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 KLHL5Q96PQ7 755 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 GCNAQ96QF7 691 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 CYP2S1Q96SQ9 504 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 UHRF1Q96T88 793 aaPredicted RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 PKP2Q99959 881 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 SLC25A23Q9BV35 468 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 UNKQ9C0B0 810 aaKnown RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 COPS7BQ9H9Q2 264 aaPredicted RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.04□□□□□ -0.8
TCF4-254ENST00000626584 CACNA2D2Q9NY47 1150 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 MARCH4Q9P2E8 410 aaPredicted RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 KLHL42Q9P2K6 505 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 EPS15L1Q9UBC2 864 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 CD300AQ9UGN4 299 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 CHD5Q8TDI0 1954 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 GREB1Q4ZG55 1949 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 TCRBV3S1A0A5B6 114 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 BBIP1A8MTZ0 92 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 STX16-NPEPL1H3BU86 382 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 UBFD1O14562 309 aaKnown RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 PRAMEF11O60813 436 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 GPC4O75487 556 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 RPP40O75818 363 aaKnown RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 CRTAMO95727 393 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 SMIM18P0DKX4 95 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 CD1DP15813 335 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 PSMA3P25788 255 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 YWHAQP27348 245 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 GRIA2P42262 883 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 ZNF157P51786 506 aaPredicted RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 MAXP61244 160 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 HERVK_113P63132 956 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 TIAL1Q01085 375 aaKnown RBP eCLIP10.04□□□□□ -0.8
TCF4-254ENST00000626584 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 MRPL58Q14197 206 aaKnown RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 POLD3Q15054 466 aaPredicted RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 KCNA10Q16322 511 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 DDR2Q16832 855 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 CNPY1Q3B7I2 92 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 USP41Q3LFD5 358 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 UGT3A2Q3SY77 523 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 C5orf22Q49AR2 442 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 AGKQ53H12 422 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 THEMIS2Q5TEJ8 643 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 FBXL22Q6P050 247 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 CYHR1Q6ZMK1 362 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 PTAR1Q7Z6K3 402 aaPredicted RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 TFAP2DQ7Z6R9 452 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 ZNF280BQ86YH2 543 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 RNF135Q8IUD6 432 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 OR6P1Q8NGX9 317 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 RHEBL1Q8TAI7 183 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 PMM1Q92871 262 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 PABPC5Q96DU9 382 aaKnown RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 TMA16Q96EY4 203 aaKnown RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 ERVK-6Q9BXR3 956 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 SLC2A11Q9BYW1 496 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.04□□□□□ -0.8
TCF4-254ENST00000626584 ZNF696Q9H7X3 374 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 CYP4F12Q9HCS2 524 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 TMEM181Q9P2C4 612 aa10.04□□□□□ -0.8
TCF4-254ENST00000626584 UXTQ9UBK9 157 aaPredicted RBP10.04□□□□□ -0.8
TCF4-254ENST00000626584 TANC1Q9C0D5 1861 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms