RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ZFP28Q8NHY6 868 aa11.3□□□□□ -0.6
VARS2-213ENST00000625423 CNOT11Q9UKZ1 510 aaKnown RBP11.3□□□□□ -0.6
VARS2-213ENST00000625423 NYNRINQ9P2P1 1898 aaKnown RBP11.3□□□□□ -0.6
VARS2-213ENST00000625423 CNTN5O94779 1100 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 S1PR4O95977 384 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 MMP2P08253 660 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 NME5P56597 212 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 GALNT1Q10472 559 aaPredicted RBP11.29□□□□□ -0.6
VARS2-213ENST00000625423 MAP7Q14244 749 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 CYTH1Q15438 398 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 MAPRE1Q15691 268 aaKnown RBP11.29□□□□□ -0.6
VARS2-213ENST00000625423 C6orf10Q5SRN2 563 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 LARP4Q71RC2 724 aaKnown RBP eCLIP11.29□□□□□ -0.69e-7■■□□□ 13.7
VARS2-213ENST00000625423 RYBPQ8N488 228 aaPredicted RBP11.29□□□□□ -0.6
VARS2-213ENST00000625423 GABPB2Q8TAK5 448 aaPredicted RBP11.29□□□□□ -0.6
VARS2-213ENST00000625423 TOP1MTQ969P6 601 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 PTERQ96BW5 349 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 RANBP9Q96S59 729 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 OCEL1Q9H607 264 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 MRGBPQ9NV56 204 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 DSEQ9UL01 958 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 Q9Y3F1 56 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 PPP6CO00743 305 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 GPR182O15218 404 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 SRP72O76094 671 aaKnown RBP11.29□□□□□ -0.6
VARS2-213ENST00000625423 SLC7A2P52569 658 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 TRAP1Q12931 704 aaKnown RBP11.29□□□□□ -0.6
VARS2-213ENST00000625423 APOFQ13790 326 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 IKBKEQ14164 716 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 UNC50Q53HI1 259 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 GNASQ5JWF2 1037 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 PSMG2Q969U7 264 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 SERPINB11Q96P15 392 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 SLC29A1Q99808 456 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 CIB1Q99828 191 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 RBM38Q9H0Z9 239 aaKnown RBP11.29□□□□□ -0.6
VARS2-213ENST00000625423 TMEM181Q9P2C4 612 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 PADI3Q9ULW8 664 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 RNF11Q9Y3C5 154 aa11.29□□□□□ -0.6
VARS2-213ENST00000625423 TCRBV3S1A0A5B6 114 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 ANKRD33BA6NCL7 494 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 SLC7A4O43246 635 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 ALDOCP09972 364 aaKnown RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 NELFEP18615 380 aaKnown RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 ETFBP38117 255 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 PTPRCAPQ14761 206 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 ALFQ53S48 1182 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 SIRPB2Q5JXA9 342 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 FUNDC1Q8IVP5 155 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 CHERPQ8IWX8 916 aaKnown RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 MYO1HQ8N1T3 1032 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 UMODL1-AS1Q8N2C9 162 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 C19orf60Q96EN9 201 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 MFSD1Q9H3U5 465 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 NOL11Q9H8H0 719 aaKnown RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 SP110Q9HB58 689 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 RGS18Q9NS28 235 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 ABI2Q9NYB9 513 aaPredicted RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 PTTG2Q9NZH5 202 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 UXTQ9UBK9 157 aaPredicted RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 GIMAP2Q9UG22 337 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 PTGDR2Q9Y5Y4 395 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 ARHGEF37A1IGU5 675 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 MROH6A6NGR9 719 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 WASH4PA8MWX3 477 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 GJB3O75712 270 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 PAPSS2O95340 614 aaPredicted RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 WISP3O95389 354 aaPredicted RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 SLC7A1P30825 629 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 SH3BP2P78314 561 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 USP41Q3LFD5 358 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 SLC39A12Q504Y0 691 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 SAMD4BQ5PRF9 694 aaKnown RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 FAM45BPQ6NSW5 357 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 HMBOX1Q6NT76 420 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 FAM45AQ8TCE6 357 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 PPWD1Q96BP3 646 aaKnown RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 DNAJC1Q96KC8 554 aaKnown RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 ZNF597Q96LX8 424 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 TRMOQ9BU70 441 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 AKTIPQ9H8T0 292 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 IL1RL2Q9HB29 575 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 VPS45Q9NRW7 570 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 CNOT6Q9ULM6 557 aaKnown RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 ABT1Q9ULW3 272 aaKnown RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 TTC3P53804 2025 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 LRRC14BA6NHZ5 514 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 ZNF839A8K0R7 811 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 SIX3O95343 332 aaPredicted RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 GPR15P49685 360 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 RPS6KA3P51812 740 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 SH3BGRP55822 239 aaPredicted RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 STX1BP61266 288 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 TUSC3Q13454 348 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 TAF1CQ15572 869 aaPredicted RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 KIF19Q2TAC6 998 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 C8orf82Q6P1X6 216 aaPredicted RBP11.28□□□□□ -0.6
VARS2-213ENST00000625423 B3GNT6Q6ZMB0 384 aa11.28□□□□□ -0.6
VARS2-213ENST00000625423 RETREG3Q86VR2 466 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms