RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 METTL7AQ9H8H3 244 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 RMI1Q9H9A7 625 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CFAP97Q9P2B7 532 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 SPATA2Q9UM82 520 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CFL1P23528 166 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ADSLP30566 484 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PRKAA2P54646 552 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 FCHO2Q0JRZ9 810 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ARMC3Q5W041 872 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 C16orf86Q6ZW13 317 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ABHD12BQ7Z5M8 362 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ARMC8Q8IUR7 673 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 NAT16Q8N8M0 369 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ACTRT2Q8TDY3 377 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 GFM1Q96RP9 751 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 NPAS2Q99743 824 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 KIAA1683Q9H0B3 1180 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 KCND1Q9NSA2 647 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ZBTB40Q9NUA8 1239 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CMTM6Q9NX76 183 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 FAM153AQ9UHL3 310 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PCDHGB2Q9Y5G2 931 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 UNC13AQ9UPW8 1703 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 SSR2P43308 183 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 GSTM5P46439 218 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CAP1Q01518 475 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PTPN21Q16825 1174 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 DENND5AQ6IQ26 1287 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CAPN13Q6MZZ7 669 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 AFTPHQ6ULP2 937 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 DNAJB7Q7Z6W7 309 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 DENND6BQ8NEG7 585 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ELMO3Q96BJ8 720 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 TMEM176AQ96HP8 235 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 SLC4A5Q9BY07 1137 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 TRIM36Q9NQ86 728 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CYP26A1O43174 497 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ATP8B1O43520 1251 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PSTPIP1O43586 416 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 NDUFA10O95299 355 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PGK1P00558 417 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 NT5EP21589 574 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ADIGQ0VDE8 80 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PDZK1Q5T2W1 519 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CCT8L2Q96SF2 557 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PNMA6EA0A0J9YXQ4 647 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 TAS2R41P59536 307 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ARG2P78540 354 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 KCNMA1Q12791 1236 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 DPYSQ14117 519 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 SF3B3Q15393 1217 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ALG1LQ6GMV1 187 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 FAM228AQ86W67 206 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 LAMC1P11047 1609 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 GJE1A6NN92 205 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SLC6A9P48067 706 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 C2orf80Q0P641 193 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 MIER2Q8N344 545 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 UTP15Q8TED0 518 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PTERQ96BW5 349 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 EAF2Q96CJ1 260 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 BCAS3Q9H6U6 928 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 KCNQ5Q9NR82 932 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PNO1Q9NRX1 252 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 LOC110117498-PIK3R3F6TDL0 507 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 MUSKO15146 869 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 NUDT17P0C025 328 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 MYL9P24844 172 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 DGKGP49619 791 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CXCL9Q07325 125 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CNKSR3Q6P9H4 555 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PXKQ7Z7A4 578 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TMEM110Q86TL2 294 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 GPSM1Q86YR5 675 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 RAVER1Q8IY67 606 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PIK3R3Q92569 461 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 C9orf72Q96LT7 481 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PSKH2Q96QS6 385 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 FAM92AA1XBS5 289 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CAPN8A6NHC0 703 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 NPR3P17342 541 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CRYBB1P53674 252 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CCDC81Q6ZN84 652 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ADAMTS15Q8TE58 950 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 UPF1Q92900 1129 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 FAM129BQ96TA1 746 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TRIM39Q9HCM9 518 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 VANGL2Q9ULK5 521 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SNX13Q9Y5W8 968 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SERPINE1P05121 402 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PKMP14618 531 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CPA1P15085 419 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CRABP2P29373 138 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 LMAN2Q12907 356 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 EMBQ6PCB8 327 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 COL23A1Q86Y22 540 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 NKAPQ8N5F7 415 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TEX47Q8TBZ9 253 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 KLHDC7BQ96G42 594 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms