RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 OR8H3Q8N146 312 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 ANKRD49Q8WVL7 239 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 CD101Q93033 1021 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 MKL1Q969V6 931 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 PCDHB18PQ96TA0 734 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 SNRNP25Q9BV90 132 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 RTFDC1Q9BY42 306 aaPredicted RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 TMEM134Q9H6X4 195 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 MTRRQ9UBK8 725 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 RPS6KB2Q9UBS0 482 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 OGDHLQ9ULD0 1010 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 CNOT6Q9ULM6 557 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 CLCA2Q9UQC9 943 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 CD163L1Q9NR16 1453 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 ADGRB1O14514 1584 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 SHPRHQ149N8 1683 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 CASKO14936 926 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 TBX1O43435 398 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 CAPZA2P47755 286 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 CENPAP49450 140 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 TDRD10Q5VZ19 366 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 OR6J1Q8NGC5 347 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 MOSPD2Q8NHP6 518 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 ALG2Q9H553 416 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 SUCOQ9UBS9 1254 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 SH3BP1Q9Y3L3 701 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 TCRBV7S2A1N4TA0A589 114 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 E5RJQ4 531 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 MTRF1O75570 445 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 SCELO95171 688 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 FYNP06241 537 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 TLDC1Q6P9B6 456 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 OMDQ99983 421 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 ACAT2Q9BWD1 397 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 EMC3Q9P0I2 261 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 SPATA31D1Q6ZQQ2 1576 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 NID2Q14112 1375 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 FAM172BPA6NC97 362 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 PGRMC2O15173 223 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 TADA2AO75478 443 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 BMP10O95393 424 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 OTCP00480 354 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 C2P06681 752 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 ADRB2P07550 413 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 DGKAP23743 735 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 NOS2P35228 1153 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 CYP4X1Q8N118 509 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 PARP8Q8N3A8 854 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 TUBA1CQ9BQE3 449 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 FAIMQ9NVQ4 179 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 LTN1O94822 1766 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 NFAT5O94916 1531 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 EML1O00423 815 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 FBP2O00757 339 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 FGF10O15520 208 aaPredicted RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 CHST10O43529 356 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 PGK1P00558 417 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 HNRNPLP14866 589 aaKnown RBP eCLIP8.93□□□□□ -0.98
VCL-206ENST00000623461 POLR2JP52435 117 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 SPIBQ01892 262 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 LIPEQ05469 1076 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 FASTKD3Q14CZ7 662 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 RASAL3Q86YV0 1011 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 SERAC1Q96JX3 654 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 EMILIN2Q9BXX0 1053 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 TRPC4Q9UBN4 977 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 MSL3P1P0C860 447 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 GNA12Q03113 381 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 SFT2D3Q587I9 215 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 SLC22A16Q86VW1 577 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 DEFB106AQ8N104 65 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 MARVELD2Q8N4S9 558 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 EFHD2Q96C19 240 aaPredicted RBP8.92□□□□□ -0.98
VCL-206ENST00000623461 CHCHD6Q9BRQ6 235 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 SPATA5L1Q9BVQ7 753 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 TRPM5Q9NZQ8 1165 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 SCAF8Q9UPN6 1271 aaKnown RBP8.92□□□□□ -0.98
VCL-206ENST00000623461 CYB561D2O14569 222 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 ALDH1A1P00352 501 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 C9P02748 559 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 NTRK1P04629 796 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 PTX3P26022 381 aaPredicted RBP8.92□□□□□ -0.98
VCL-206ENST00000623461 ACAP2Q15057 778 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 RIOX2Q8IUF8 465 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 PXMP2Q9NR77 195 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 MDM4O15151 490 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 FAM189A1O60320 539 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 USP12O75317 370 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 PIAS1O75925 651 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 IPO13O94829 963 aaKnown RBP8.92□□□□□ -0.98
VCL-206ENST00000623461 STAU1O95793 577 aaKnown RBP8.92□□□□□ -0.98
VCL-206ENST00000623461 LINC00032P0C843 101 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 TMBIM6P55061 237 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 OR2B2Q9GZK3 357 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 ISPDA4D126 451 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 FOXO6A8MYZ6 492 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 UBXN8O00124 270 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 TGFB1I1O43294 461 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 SUV39H1O43463 412 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 CYP4B1P13584 511 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms