RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 HMGCLL1Q8TB92 370 aa12□□□□□ -0.49
TP53-227ENST00000622645 CCDC126Q96EE4 140 aa12□□□□□ -0.49
TP53-227ENST00000622645 KLHL4Q9C0H6 718 aa12□□□□□ -0.49
TP53-227ENST00000622645 XRN2Q9H0D6 950 aaKnown RBP eCLIP12□□□□□ -0.49
TP53-227ENST00000622645 CD3EAPO15446 510 aaKnown RBP12□□□□□ -0.49
TP53-227ENST00000622645 RNASEH1O60930 286 aaKnown RBP12□□□□□ -0.49
TP53-227ENST00000622645 GLP2RO95838 553 aa12□□□□□ -0.49
TP53-227ENST00000622645 LYNP07948 512 aa12□□□□□ -0.49
TP53-227ENST00000622645 FGFR3P22607 806 aa12□□□□□ -0.49
TP53-227ENST00000622645 SLC6A4P31645 630 aa12□□□□□ -0.49
TP53-227ENST00000622645 YBEYP58557 167 aaPredicted RBP12□□□□□ -0.49
TP53-227ENST00000622645 HERC3Q15034 1050 aa12□□□□□ -0.49
TP53-227ENST00000622645 PRSS55Q6UWB4 352 aaPredicted RBP12□□□□□ -0.49
TP53-227ENST00000622645 OR7D4Q8NG98 312 aa12□□□□□ -0.49
TP53-227ENST00000622645 STON2Q8WXE9 905 aa12□□□□□ -0.49
TP53-227ENST00000622645 GSTO2Q9H4Y5 243 aa12□□□□□ -0.49
TP53-227ENST00000622645 EML4Q9HC35 981 aaKnown RBP12□□□□□ -0.49
TP53-227ENST00000622645 PLXNA3P51805 1871 aa12□□□□□ -0.49
TP53-227ENST00000622645 CCDC189A1A4V9 331 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 PPP6CO00743 305 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 ENPP3O14638 875 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 NBNO60934 754 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 IMPDH1P20839 514 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 TIAL1Q01085 375 aaKnown RBP eCLIP11.99□□□□□ -0.49
TP53-227ENST00000622645 SP3Q02447 781 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 GSTA3Q16772 222 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 NAIF1Q69YI7 327 aaPredicted RBP11.99□□□□□ -0.49
TP53-227ENST00000622645 FUT10Q6P4F1 479 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 GALNT7Q86SF2 657 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 PCDH20Q8N6Y1 951 aaKnown RBP11.99□□□□□ -0.49
TP53-227ENST00000622645 PPP2R3CQ969Q6 453 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 EXOC2Q96KP1 924 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 NSMCE3Q96MG7 304 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 CASD1Q96PB1 797 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 NR1H4Q96RI1 486 aaPredicted RBP11.99□□□□□ -0.49
TP53-227ENST00000622645 TUBGCP5Q96RT8 1024 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 SPON2Q9BUD6 331 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 MEAF6Q9HAF1 191 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 PDFQ9HBH1 243 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 TRPC7Q9HCX4 862 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 STARD7Q9NQZ5 370 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 CCDC167Q9P0B6 97 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 TRAF6Q9Y4K3 522 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 PCDHB7Q9Y5E2 793 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 FRMPD3Q5JV73 1810 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 A0A1W2PQ45 241 aaPredicted RBP11.99□□□□□ -0.49
TP53-227ENST00000622645 A0A1W2PQY0 241 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 ENO4A6NNW6 628 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 F5H5T6 163 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 ATF6P18850 670 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 MAPKAPK2P49137 400 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 RPS24P62847 133 aaKnown RBP11.99□□□□□ -0.49
TP53-227ENST00000622645 ACVR1Q04771 509 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 RING1Q06587 406 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 GPNMBQ14956 572 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 GRAMD1BQ3KR37 738 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 CYHR1Q6ZMK1 362 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 CHSY3Q70JA7 882 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 LRRC8DQ7L1W4 858 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 SLC22A9Q8IVM8 553 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 BHLHE22Q8NFJ8 381 aaPredicted RBP11.99□□□□□ -0.49
TP53-227ENST00000622645 FEM1CQ96JP0 617 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 SMIM14Q96QK8 99 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 POLR3BQ9NW08 1133 aaPredicted RBP11.99□□□□□ -0.49
TP53-227ENST00000622645 THSD7BQ9C0I4 1608 aa11.99□□□□□ -0.49
TP53-227ENST00000622645 LRRC14BA6NHZ5 514 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 UBDO15205 165 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 ADAM12O43184 909 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 SNUPNO95149 360 aaKnown RBP11.98□□□□□ -0.49
TP53-227ENST00000622645 SIX3O95343 332 aaPredicted RBP11.98□□□□□ -0.49
TP53-227ENST00000622645 FGF1P05230 155 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 SERPINF2P08697 491 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 ZDHHC11BP0C7U3 371 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 HLA-DPA1P20036 260 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 FDXRP22570 491 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 ME2P23368 584 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 HOXD9P28356 352 aaPredicted RBP11.98□□□□□ -0.49
TP53-227ENST00000622645 RGRP47804 291 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 SATB1Q01826 763 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 ZNF678Q5SXM1 525 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 ARMC3Q5W041 872 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 FAM45BPQ6NSW5 357 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 PQLC1Q8N2U9 271 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 FAM45AQ8TCE6 357 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 BRSK1Q8TDC3 778 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 FBRSL1Q9HCM7 1045 aaKnown RBP11.98□□□□□ -0.49
TP53-227ENST00000622645 ZDHHC7Q9NXF8 308 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 VPS28Q9UK41 221 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 PSMD13Q9UNM6 376 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 ZFP37Q9Y6Q3 630 aaPredicted RBP11.98□□□□□ -0.49
TP53-227ENST00000622645 CAPN8A6NHC0 703 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 MOXD2PA6NHM9 499 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 H3BMM5 538 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 GPC4O75487 556 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 HSPA1AP0DMV8 641 aaKnown RBP11.98□□□□□ -0.49
TP53-227ENST00000622645 HSPA1BP0DMV9 641 aaKnown RBP11.98□□□□□ -0.49
TP53-227ENST00000622645 CD1DP15813 335 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 AGKQ53H12 422 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 UNC50Q53HI1 259 aa11.98□□□□□ -0.49
TP53-227ENST00000622645 MRNIPQ6NTE8 343 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms