RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 SYNPOQ8N3V7 929 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 NECAB3Q96P71 396 aaPredicted RBP17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 MCCC1Q96RQ3 725 aaPredicted RBP17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 SRPK1Q96SB4 655 aaKnown RBP17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 GPR63Q9BZJ6 419 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 TRABDQ9H4I3 376 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 TBC1D17Q9HA65 648 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 SLC2A6Q9UGQ3 507 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 C1orf232A0A0U1RR37 186 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 TCRBV9S1A1TA0A576 114 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 NPIPB15A6NHN6 443 aaPredicted RBP17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 FAM170BA6NMN3 283 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 C2orf81A6NN90 581 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 AGPSO00116 658 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 SYF2O95926 243 aaKnown RBP17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 NFKBIAP25963 317 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 STX2P32856 288 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 COPAP53621 1224 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 SEMG2Q02383 582 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 CST6Q15828 149 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 ESRP1Q6NXG1 681 aaKnown RBP17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 FBXL19Q6PCT2 694 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 LYSMD3Q7Z3D4 306 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 FBF1Q8TES7 1133 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 NELL2Q99435 816 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 PCDH12Q9NPG4 1184 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 B4GALT6Q9UBX8 382 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 FAM169AQ9Y6X4 670 aa17.86■□□□□ 0.45
PTCHD3-202ENST00000622555 ZCWPW2A0A1B0GU75 182 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 PLK4O00444 970 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 STK25O00506 426 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 MID1O15344 667 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 PAPSS2O95340 614 aaPredicted RBP17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 ADH1BP00325 375 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 SHBGP04278 402 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 CYP2A6P11509 494 aaPredicted RBP17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 LPOP22079 712 aaPredicted RBP17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 RPS14P62263 151 aaKnown RBP17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 GLIPR1L2Q4G1C9 344 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 TTC30BQ8N4P2 665 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 OR2W6PQ8NHA6 318 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 LYSMD1Q96S90 227 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 TREX1Q9NSU2 369 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 POLR3BQ9NW08 1133 aaPredicted RBP17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 SCN8AQ9UQD0 1980 aa17.85■□□□□ 0.45
PTCHD3-202ENST00000622555 NUDT17P0C025 328 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 PAMP19021 973 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 NEK3P51956 506 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 ZNF140P52738 457 aaPredicted RBP17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 TMPRSS15P98073 1019 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 PDE1BQ01064 536 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 IFFO1Q0D2I5 559 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 PTPRCAPQ14761 206 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 SMAD1Q15797 465 aaKnown RBP17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 CNGA3Q16281 694 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 SKIDA1Q1XH10 827 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 ERAP2Q6P179 960 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 TRMT10BQ6PF06 316 aaKnown RBP17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 CRTC1Q6UUV9 634 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 ERN2Q76MJ5 926 aaKnown RBP17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 TSPAN33Q86UF1 283 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 TMPRSS6Q8IU80 811 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 UNC5BQ8IZJ1 945 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 IQCKQ8N0W5 287 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 OR13C4Q8NGS5 318 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 STYXQ8WUJ0 223 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 DNAJC1Q96KC8 554 aaKnown RBP17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 MKRN2Q9H000 416 aaKnown RBP17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 ZFYVE1Q9HBF4 777 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 CD248Q9HCU0 757 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 PPANQ9NQ55 473 aaKnown RBP17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 IL1RAPL1Q9NZN1 696 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 STX7O15400 261 aaKnown RBP17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 CLDN7O95471 211 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 ADRB3P13945 408 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 C5AR1P21730 350 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 VIPR1P32241 457 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 ZXDAP98168 799 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 CNTN1Q12860 1018 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 CDKN3Q16667 212 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 LONRF1Q17RB8 773 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 ALS2CLQ60I27 953 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 LRRC66Q68CR7 880 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 TMEM92Q6UXU6 159 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 OR4K2Q8NGD2 314 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 OR13J1Q8NGT2 312 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 PEX13Q92968 403 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 ZBTB9Q96C00 473 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 ZIM3Q96PE6 472 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 CCDC77Q9BR77 488 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 HDAC8Q9BY41 377 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 SLC6A17Q9H1V8 727 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 ACSS3Q9H6R3 686 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 C20orf96Q9NUD7 363 aaPredicted RBP17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 MOCS1Q9NZB8 636 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 RABGEF1Q9UJ41 708 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 RIMKLBQ9ULI2 386 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 PKP3Q9Y446 797 aa17.84■□□□□ 0.45
PTCHD3-202ENST00000622555 TCRBV21S2A2A0A5A6 115 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms