RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 ITGB1P05556 798 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 FAM58BPP0C7Q3 252 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 HAPLN1P10915 354 aaPredicted RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 CD1DP15813 335 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 ZNF26P17031 533 aaPredicted RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 HLA-DPA1P20036 260 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 OGNP20774 298 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 GPX3P22352 226 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 YY1P25490 414 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 PSMA3P25788 255 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 SLC7A1P30825 629 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 MSX2P35548 267 aaPredicted RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 THPOP40225 353 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 KCNC1P48547 511 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 MRPL19P49406 292 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 ARSDP51689 593 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 CDKN2DP55273 166 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 YBEYP58557 167 aaPredicted RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 MYBPC1Q00872 1141 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 YWHAHQ04917 246 aaPredicted RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 APOFQ13790 326 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 NFE2Q16621 373 aaPredicted RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 TRIM71Q2Q1W2 868 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 SLC39A12Q504Y0 691 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 SAMD4BQ5PRF9 694 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 IL23RQ5VWK5 629 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 PAOXQ6QHF9 649 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 CYHR1Q6ZMK1 362 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 RNF135Q8IUD6 432 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 SCN4BQ8IWT1 228 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 ALDH16A1Q8IZ83 802 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 PGBD5Q8N414 524 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 PCDH20Q8N6Y1 951 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 GOLM1Q8NBJ4 401 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 HASPINQ8TF76 798 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 HDAC10Q969S8 669 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 ZUFSPQ96AP4 578 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 ROPN1LQ96C74 230 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 DGCR14Q96DF8 476 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 ZNF597Q96LX8 424 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 UNKQ9C0B0 810 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 TFB2MQ9H5Q4 396 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 SP110Q9HB58 689 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 OLA1Q9NTK5 396 aaKnown RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 COMMD8Q9NX08 183 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 ADA2Q9NZK5 511 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 MARCH4Q9P2E8 410 aaPredicted RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 MTF2Q9Y483 593 aaPredicted RBP9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 AP4S1Q9Y587 144 aa9.64□□□□□ -0.87
IGHV3-54-201ENST00000622166 PRAMEF11O60813 436 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 RPP40O75818 363 aaKnown RBP9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 CNTN5O94779 1100 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 IGLV3-27P01718 113 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 FGF1P05230 155 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 PBX3P40426 434 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 MAPKAPK2P49137 400 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 NAA20P61599 178 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 HERVK_113P63132 956 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 PRAMEP78395 509 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 TXNL4AP83876 142 aaKnown RBP9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 CDKL1Q00532 357 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 TIAL1Q01085 375 aaKnown RBP eCLIP9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 DSC1Q08554 894 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 ITKQ08881 620 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 MTA1Q13330 715 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 SERINC3Q13530 473 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 PPP1R3AQ16821 1122 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 PARP15Q460N3 678 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 SPATS1Q496A3 300 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 ALFQ53S48 1182 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 PRMT9Q6P2P2 845 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 ZNF549Q6P9A3 640 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 BORAQ6PGQ7 559 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 KDELC2Q7Z4H8 507 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 PTAR1Q7Z6K3 402 aaPredicted RBP9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 FUNDC1Q8IVP5 155 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 CHERPQ8IWX8 916 aaKnown RBP9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 RNF148Q8N7C7 305 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 ANKFN1Q8N957 763 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 RHEBL1Q8TAI7 183 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 IGSF8Q969P0 613 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 ATP6V1E2Q96A05 226 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 SLCO4A1Q96BD0 722 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 PTERQ96BW5 349 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 BTN2A3PQ96KV6 586 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 ZNF599Q96NL3 588 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 KLHL5Q96PQ7 755 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 GPATCH1Q9BRR8 931 aaKnown RBP9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 ERVK-6Q9BXR3 956 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 RBM38Q9H0Z9 239 aaKnown RBP9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 RETREG1Q9H6L5 497 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 ALG9Q9H6U8 611 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 SPC25Q9HBM1 224 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 SPAG4Q9NPE6 437 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 RGS18Q9NS28 235 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 GMIPQ9P107 970 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 UXTQ9UBK9 157 aaPredicted RBP9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 NUDT5Q9UKK9 219 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 LZTS1Q9Y250 596 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 NDUFAF1Q9Y375 327 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms