RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	CSF3R	Q99062	836 aa		14.44	□□□□□ -0.1
SYNRG-231	ENST00000622045	MLPH	Q9BV36	600 aa	Predicted RBP	14.44	□□□□□ -0.1
SYNRG-231	ENST00000622045	FTHL17	Q9BXU8	183 aa		14.44	□□□□□ -0.1
SYNRG-231	ENST00000622045	RAD21L1	Q9H4I0	556 aa		14.44	□□□□□ -0.1
SYNRG-231	ENST00000622045	CD300A	Q9UGN4	299 aa		14.44	□□□□□ -0.1
SYNRG-231	ENST00000622045	TRIM64C	A6NLI5	447 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	ERI2	A8K979	691 aa	Known RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	CLASP2	O75122	1294 aa	Known RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	CA8	P35219	290 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	RAB10	P61026	200 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	TRAP1	Q12931	704 aa	Known RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	ZBTB17	Q13105	803 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	GEN1	Q17RS7	908 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	KIF19	Q2TAC6	998 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	CLEC6A	Q6EIG7	209 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	HFE2	Q6ZVN8	426 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	ARMCX2	Q7L311	632 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	PNPLA1	Q8N8W4	532 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	PCYOX1L	Q8NBM8	494 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	ABHD11	Q8NFV4	315 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	PHF21B	Q96EK2	531 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	UHRF1	Q96T88	793 aa	Predicted RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	SEPHS2	Q99611	448 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	DOK1	Q99704	481 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	MRPL46	Q9H2W6	279 aa	Known RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	TTK	P33981	857 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	TKTL1	P51854	596 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	MAP3K7CL	P57077	242 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	RPS3A	P61247	264 aa	Known RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	VGLL4	Q14135	290 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	LRRC52	Q8N7C0	313 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	TXNDC5	Q8NBS9	432 aa	Known RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	OTUD5	Q96G74	571 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	LHPP	Q9H008	270 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	ING2	Q9H160	280 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	GBA3	Q9H227	469 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	TPK1	Q9H3S4	243 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	EHD1	Q9H4M9	534 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	PLEKHA5	Q9HAU0	1116 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	GOLGA2P5	Q9HBQ8	144 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	GTF2IRD1	Q9UHL9	959 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	TMA7	Q9Y2S6	64 aa	Known RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	SNX10	Q9Y5X0	201 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	MRPL42	Q9Y6G3	142 aa	Known RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	SOCS7	O14512	581 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	MTSS1	O43312	755 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	XYLB	O75191	536 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	CYP2C9	P11712	490 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	CD68	P34810	354 aa	Predicted RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	HPCAL1	P37235	193 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	GJA9	P57773	515 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	LSM3	P62310	102 aa	Known RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	ARL13B	Q3SXY8	428 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	ZNF354C	Q86Y25	554 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	CENPL	Q8N0S6	344 aa	Predicted RBP	14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	SPATA22	Q8NHS9	363 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	PPP1R13L	Q8WUF5	828 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	TRHDE	Q9UKU6	1024 aa		14.43	□□□□□ -0.1
SYNRG-231	ENST00000622045	DFFA	O00273	331 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	DCLK1	O15075	740 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	NCAM2	O15394	837 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	RECQL4	O94761	1208 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	MYO1D	O94832	1006 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	PSMA4	P25789	261 aa	Known RBP	14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	TKT	P29401	623 aa	Known RBP	14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	ALDH4A1	P30038	563 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	SCNN1A	P37088	669 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	SPCS2	Q15005	226 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	BCL2A1	Q16548	175 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	CYP51A1	Q16850	503 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	PRR23B	Q6ZRT6	265 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	PIWIL4	Q7Z3Z4	852 aa	Known RBP	14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	RETREG3	Q86VR2	466 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	CRYBG2	Q8N1P7	616 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	MFSD2A	Q8NA29	543 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	ADAMTS16	Q8TE57	1224 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	C9orf16	Q9BUW7	83 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	OSBPL2	Q9H1P3	480 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	SPON1	Q9HCB6	807 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	ZBBX	A8MT70	800 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	NME4	O00746	187 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	DAB1	O75553	588 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	YBX3	P16989	372 aa	Known RBP eCLIP	14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	CAPG	P40121	348 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	OCA2	Q04671	838 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	INPP5A	Q14642	412 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	DCAF4L1	Q3SXM0	396 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	VPS26B	Q4G0F5	336 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	DEPDC1	Q5TB30	811 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	ARMCX6	Q7L4S7	300 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	CEP97	Q8IW35	865 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	C1QTNF1	Q9BXJ1	281 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	ATXN3L	Q9H3M9	355 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	CCM2L	Q9NUG4	571 aa	Predicted RBP	14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	UBQLN1	Q9UMX0	589 aa	Known RBP	14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	SCN1A	P35498	2009 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	PAX3	P23760	479 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	POLD3	Q15054	466 aa	Predicted RBP	14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	IMPG1	Q17R60	797 aa		14.42	□□□□□ -0.1
SYNRG-231	ENST00000622045	TSTD2	Q5T7W7	516 aa		14.42	□□□□□ -0.1

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms