RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 RCN3Q96D15 328 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 ZFYVE19Q96K21 471 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 ZSCAN5AQ9BUG6 496 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 RHOBTB2Q9BYZ6 727 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 LRRC40Q9H9A6 602 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 CHST12Q9NRB3 414 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 SAC3D1A6NKF1 404 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 TOR1BO14657 336 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 ACSL4O60488 711 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 SYNCRIPO60506 623 aaKnown RBP10.41□□□□□ -0.74
VPS11-207ENST00000620429 USP12O75317 370 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 VAPBO95292 243 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 VNN1O95497 513 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 CALB1P05937 261 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 ENO3P13929 434 aaPredicted RBP10.41□□□□□ -0.74
VPS11-207ENST00000620429 GFAPP14136 432 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 ATF6P18850 670 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 SERPINB5P36952 375 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 TALDO1P37837 337 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 RHAGQ02094 409 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 PIGHQ14442 188 aaPredicted RBP10.41□□□□□ -0.74
VPS11-207ENST00000620429 ZNF438Q7Z4V0 828 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 TMEM151BQ8IW70 566 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 CBR4Q8N4T8 237 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 TMEM35BQ8NCS4 154 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 OR2T3Q8NH03 318 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 ST6GAL2Q96JF0 529 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 RNF170Q96K19 258 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 HEXIM2Q96MH2 286 aaKnown RBP10.41□□□□□ -0.74
VPS11-207ENST00000620429 EFCAB1Q9HAE3 211 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 PAQR5Q9NXK6 330 aaPredicted RBP10.41□□□□□ -0.74
VPS11-207ENST00000620429 ATP6V1HQ9UI12 483 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 SLCO3A1Q9UIG8 710 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 BOLA1Q9Y3E2 137 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 PTPRJQ12913 1337 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 C16orf96A6NNT2 1141 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 PDZK1P1A8MUH7 402 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 H0YC42 278 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 PLK4O00444 970 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 CTDSP2O14595 271 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 EXTL3O43909 919 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 SPNP16150 400 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 ATF4P18848 351 aaPredicted RBP10.4□□□□□ -0.74
VPS11-207ENST00000620429 GRK3P35626 688 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 CAPGP40121 348 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 LIG4P49917 911 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 TPD52P55327 224 aaPredicted RBP10.4□□□□□ -0.74
VPS11-207ENST00000620429 CHST15Q7LFX5 561 aaPredicted RBP10.4□□□□□ -0.74
VPS11-207ENST00000620429 CCDC103Q8IW40 242 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 ADGRF2Q8IZF7 708 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 NDUFAF2Q8N183 169 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 PBXIP1Q96AQ6 731 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 ADNPQ9H2P0 1102 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 PLSCR3Q9NRY6 295 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 ANKEF1Q9NU02 776 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 TBC1D22BQ9NU19 505 aa10.4□□□□□ -0.74
VPS11-207ENST00000620429 MAGEB16A2A368 324 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 MEN1O00255 615 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 DPYSL3Q14195 570 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 TYSND1Q2T9J0 566 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 Q5BKY6 102 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 NIPA1Q7RTP0 329 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 VN1R5Q7Z5H4 357 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 LINC00518Q8N0U6 118 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 CCDC185Q8N715 623 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 PSMA8Q8TAA3 256 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 FBXL20Q96IG2 436 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 DACH2Q96NX9 599 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 C9orf16Q9BUW7 83 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 COG4Q9H9E3 785 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 ANKHQ9HCJ1 492 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 MAT2BQ9NZL9 334 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 TMEM216Q9P0N5 145 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.4□□□□□ -0.75
VPS11-207ENST00000620429 VWA7Q9Y334 891 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 TEX264Q9Y6I9 313 aa10.4□□□□□ -0.75
VPS11-207ENST00000620429 PCP4L1A6NKN8 68 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 C3orf70A6NLC5 250 aaPredicted RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 WDR64B1ANS9 1081 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 STX16-NPEPL1H3BU86 382 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 RGS20O76081 388 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 JUNP05412 331 aaKnown RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 YES1P07947 543 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 PCNAP12004 261 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 CD1EP15812 388 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 EEF1B2P24534 225 aaKnown RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 PSMA2P25787 234 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 FKBP1BP68106 108 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 ART3Q13508 389 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 TMEM132BQ14DG7 1078 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 IGSF11Q5DX21 431 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 TOR2AQ5JU69 321 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 CST9Q5W186 159 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 STEAP3Q658P3 488 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 SDE2Q6IQ49 451 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 HORMAD1Q86X24 394 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 RFX6Q8HWS3 928 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 EPHX4Q8IUS5 362 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 CARNMT1Q8N4J0 409 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 SVOPQ8N4V2 548 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms