RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 ARL13AQ5H913 290 aaPredicted RBP12.31□□□□□ -0.44
MATR3-227ENST00000618441 FAM219BQ5XKK7 198 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 SH2D5Q6ZV89 423 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 C16orf62Q7Z3J2 963 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 OR2T34Q8NGX1 318 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 GRPEL2Q8TAA5 225 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 C1orf74Q96LT6 269 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 FEM1AQ9BSK4 669 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 C2orf40Q9H1Z8 148 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 SPAG4Q9NPE6 437 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 DCDC2Q9UHG0 476 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 DNMT3LQ9UJW3 386 aa12.31□□□□□ -0.44
MATR3-227ENST00000618441 COPG1Q9Y678 874 aaKnown RBP12.31□□□□□ -0.44
MATR3-227ENST00000618441 ABCA3Q99758 1704 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 TYW5A2RUC4 315 aaKnown RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 SAGE2PA6NJ88 616 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 TK2O00142 265 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 MSH4O15457 936 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 GRAP2O75791 330 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 ALDH1A2O94788 518 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 COL6A1P12109 1028 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 TFEBP19484 476 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 ATP6V1B2P21281 511 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 CYP2C18P33260 490 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 CCT3P49368 545 aaKnown RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 STX5Q13190 355 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 CDK10Q15131 360 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 TMEM126BQ8IUX1 230 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 PLD6Q8N2A8 252 aaKnown RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 GIMAP1Q8WWP7 306 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 RPL3LQ92901 407 aaKnown RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 DNMT3BQ9UBC3 853 aaKnown RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 MRPS7Q9Y2R9 242 aaKnown RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 MFHAS1Q9Y4C4 1052 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 PSAT1Q9Y617 370 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 GLI3P10071 1580 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 ISPDA4D126 451 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 EIF3DO15371 548 aaKnown RBP eCLIP12.3□□□□□ -0.44
MATR3-227ENST00000618441 XPNPEP2O43895 674 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 PPP1R11O60927 126 aaPredicted RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 HNRNPLP14866 589 aaKnown RBP eCLIP12.3□□□□□ -0.44
MATR3-227ENST00000618441 DNAJB1P25685 340 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 RRM2P31350 389 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 MAP2K4P45985 399 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 LEPRP48357 1165 aaKnown RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 SERPINB9P50453 376 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 IL5RAQ01344 420 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 TRAF3Q13114 568 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 ARMC4Q5T2S8 1044 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 OR8H1Q8NGG4 311 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 SLC22A8Q8TCC7 542 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 ACMSDQ8TDX5 336 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 NKD2Q969F2 451 aaPredicted RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 SLCO4A1Q96BD0 722 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 CLPBQ9H078 707 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 NOBOXO60393 691 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 PGLSO95336 258 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 IL1BP01584 269 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 CLEC2LP0C7M8 214 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 HLCSP50747 726 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 RPL14P50914 215 aaKnown RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 SYT16Q17RD7 645 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 QRICH1Q2TAL8 776 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 ZNF438Q7Z4V0 828 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 SLC22A15Q8IZD6 547 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 GLB1L3Q8NCI6 653 aaPredicted RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 FBXL18Q96ME1 805 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 FYTTD1Q96QD9 318 aaKnown RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
MATR3-227ENST00000618441 TBC1D13Q9NVG8 400 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 SLC39A10Q9ULF5 831 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 KLHL20Q9Y2M5 609 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 NUP98P52948 1817 aa12.3□□□□□ -0.44
MATR3-227ENST00000618441 FADS2O95864 444 aaKnown RBP12.29□□□□□ -0.44
MATR3-227ENST00000618441 FGRP09769 529 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 GARSP41250 739 aaKnown RBP12.29□□□□□ -0.44
MATR3-227ENST00000618441 GRIA4P48058 902 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 IRF9Q00978 393 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 GALNT2Q10471 571 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
MATR3-227ENST00000618441 ZNF544Q6NX49 715 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 ERMP1Q7Z2K6 904 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 FAM20AQ96MK3 541 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 SNX6Q9UNH7 406 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 COL4A1P02462 1669 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 FAM25EA8MYX2 175 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 HNRNPDLO14979 420 aaKnown RBP12.29□□□□□ -0.44
MATR3-227ENST00000618441 FSHRP23945 695 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 PLK1P53350 603 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 ORC1Q13415 861 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 BMT2Q1RMZ1 405 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 MTERF2Q49AM1 385 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 LINC00523Q86TU6 105 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 SLC35B2Q8TB61 432 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 DNAJB14Q8TBM8 379 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 RASSF5Q8WWW0 418 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 UCK2Q9BZX2 261 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 VPS33BQ9H267 617 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 MCCC2Q9HCC0 563 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms