RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 C17orf64Q86WR6 236 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 BPIFB6Q8NFQ5 453 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 OR4L1Q8NH43 312 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 H3BM21 787 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 SCN2BO60939 215 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 TOP3BO95985 862 aaKnown RBP11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 CRYBB1P53674 252 aaPredicted RBP11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ATP6V0D1P61421 351 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ATXN7L2Q5T6C5 722 aaPredicted RBP11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ARCQ7LC44 396 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ANKRD52Q8NB46 1076 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 FAR1Q8WVX9 515 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 PPCDCQ96CD2 204 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 SLC35C2Q9NQQ7 365 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 GMIPQ9P107 970 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ARHGAP20Q9P2F6 1191 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 HPSEQ9Y251 543 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 SAMHD1Q9Y3Z3 626 aaKnown RBP11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 RGSL1A5PLK6 1076 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 SUV39H1O43463 412 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 CXCL14O95715 111 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ERBB2P04626 1255 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 CYP4F2P78329 520 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 CYP4F3Q08477 520 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ULK3Q6PHR2 472 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ZNF540Q8NDQ6 660 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 SLC47A1Q96FL8 570 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 C8orf4Q9NR00 106 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 FBXO6Q9NRD1 293 aaPredicted RBP11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 AGO1Q9UL18 857 aaKnown RBP11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 MRPS7Q9Y2R9 242 aaKnown RBP11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 TNS2Q63HR2 1409 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 G3V2T6 193 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 CST1P01037 141 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 RPL38P63173 70 aaKnown RBP11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 CDKAL1Q5VV42 579 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 DEF8Q6ZN54 512 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 WDR60Q8WVS4 1066 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ARHGAP23Q9P227 1491 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 LRIG2O94898 1065 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 FGBP02675 491 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 MASP1P48740 699 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 SLC7A2P52569 658 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 OLR1P78380 273 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 TSHZ1Q6ZSZ6 1077 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 GALNT7Q86SF2 657 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 S100ZQ8WXG8 99 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 AP2M1Q96CW1 435 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ZDHHC4Q9NPG8 344 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 C2CD2Q9Y426 696 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 FAM205AQ6ZU69 1335 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 SLC15A5A6NIM6 579 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 RSL1D1O76021 490 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PUDPQ08623 228 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 C12orf50Q8NA57 414 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 DNAJB14Q8TBM8 379 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 LINGO1Q96FE5 620 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 MGAT4AQ9UM21 535 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 MATN4O95460 622 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 RARAP10276 462 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 ADSSP30520 456 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 HNF4AP41235 474 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 TAF5Q15542 800 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 RNF148Q8N7C7 305 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 TMPRSS4Q9NRS4 437 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 GPC6Q9Y625 555 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 COL1A2P08123 1366 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 NOGQ13253 232 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 QPRTQ15274 297 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PSMD5Q16401 504 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 FAM151BQ6UXP7 276 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 RASSF6Q6ZTQ3 369 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 FAM92BQ6ZTR7 304 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PIK3C3Q8NEB9 887 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 CCDC54Q8NEL0 328 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PIH1D2Q8WWB5 315 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 SLC4A9Q96Q91 983 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 DDX18Q9NVP1 670 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 HCN3Q9P1Z3 774 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 MRPL42Q9Y6G3 142 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 UBR1Q8IWV7 1749 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 UBA1P22314 1058 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 ZNF730Q6ZMV8 503 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PIWIL4Q7Z3Z4 852 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PTGR2Q8N8N7 351 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PHPT1Q9NRX4 125 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 IMP3Q9NV31 184 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 CYB5AP00167 134 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 TFEBP19484 476 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PRKG2Q13237 762 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 LARS2Q15031 903 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 B3GNT6Q6ZMB0 384 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PTCHD4Q6ZW05 846 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PRCCQ92733 491 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 FUT8Q9BYC5 575 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 MTRRQ9UBK8 725 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 TRPS1Q9UHF7 1281 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 CHST10O43529 356 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 SIN3BO75182 1162 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms