RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 SYNE4Q8N205 404 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 ZBTB44Q8NCP5 570 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 TTLQ8NG68 377 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 OR13J1Q8NGT2 312 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 PCNPQ8WW12 178 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 GIMAP1Q8WWP7 306 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 NECTIN4Q96NY8 510 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 TRNT1Q96Q11 434 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 TSEN34Q9BSV6 310 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 CUEDC1Q9NWM3 386 aaPredicted RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 PAK1IP1Q9NWT1 392 aaPredicted RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 MAP3K20Q9NYL2 800 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF652Q9Y2D9 606 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 U3KQV3 271 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 ASTN2O75129 1339 aaPredicted RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 PXDNQ92626 1479 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 FAM92AA1XBS5 289 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 GCATO75600 419 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 DNAJB5O75953 348 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 POU1F1P28069 291 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 BCAR1P56945 870 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 HSPA14Q0VDF9 509 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 FAPQ12884 760 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 NFYCQ13952 458 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 TSC22D1Q15714 1073 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 MEP1AQ16819 746 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 SYT16Q17RD7 645 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 CACHD1Q5VU97 1274 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 CHMP1BQ7LBR1 199 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 LYSMD2Q8IV50 215 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 TIGD4Q8IY51 512 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 CNTD1Q8N815 330 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 FAM83FQ8NEG4 500 aaPredicted RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 TOP1MTQ969P6 601 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 NSMCE2Q96MF7 247 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 VAT1Q99536 393 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 GTPBP2Q9BX10 602 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 RACGAP1Q9H0H5 632 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 CHMP1AQ9HD42 196 aaPredicted RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 XPNPEP3Q9NQH7 507 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 EXD2Q9NVH0 621 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 PIH1D1Q9NWS0 290 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 SLC39A10Q9ULF5 831 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 PEX16Q9Y5Y5 336 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 MYH3P11055 1940 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 LMTK3Q96Q04 1460 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 TCRBV5S4A2TA0A5A2 114 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 USP17L15C9J2P7 530 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 USP17L13C9JLJ4 530 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 USP17L11C9JVI0 530 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 USP17L18D6R9N7 530 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 USP17L22D6RA61 530 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 USP17L17D6RBQ6 530 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 USP17L19D6RCP7 530 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 USP17L20D6RJB6 530 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 H7C2Y5 167 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 TRDMT1O14717 391 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 GMDSO60547 372 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 PLIN3O60664 434 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 PGRP06401 933 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 ITGAVP06756 1048 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 TSHRP16473 764 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 SPRP35270 261 aaPredicted RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 PSMC6P62333 389 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 USP17L24Q0WX57 530 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 ELOAQ14241 798 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 POU4F3Q15319 338 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 ECM1Q16610 540 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 PPM1JQ5JR12 505 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 RBM48Q5RL73 367 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 KIAA1841Q6NSI8 718 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 SPESP1Q6UW49 350 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 METTL4Q8N3J2 472 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 STX19Q8N4C7 294 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF276Q8N554 614 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 RHOXF1Q8NHV9 184 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 C12orf57Q99622 126 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 SPOCK3Q9BQ16 436 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 USB1Q9BQ65 265 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 PPIL3Q9H2H8 161 aaKnown RBP7.41□□□□□ -1.22
PDE6A-205ENST00000617647 CAB39LQ9H9S4 337 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 SPON1Q9HCB6 807 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 VTI1BQ9UEU0 232 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 ADAM30Q9UKF2 790 aa7.41□□□□□ -1.22
PDE6A-205ENST00000617647 ASTN1O14525 1302 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 TMEM63AO94886 807 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 CYP2A7P20853 494 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 ERVFC1P60507 584 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 ALDH6A1Q02252 535 aaKnown RBP7.4□□□□□ -1.22
PDE6A-205ENST00000617647 CCDC142Q17RM4 750 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 TIGD7Q6NT04 549 aaPredicted RBP7.4□□□□□ -1.22
PDE6A-205ENST00000617647 LRRC17Q8N6Y2 441 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 ZBTB38Q8NAP3 1195 aaPredicted RBP7.4□□□□□ -1.22
PDE6A-205ENST00000617647 TP53I13Q8NBR0 393 aaPredicted RBP7.4□□□□□ -1.22
PDE6A-205ENST00000617647 GLB1L3Q8NCI6 653 aaPredicted RBP7.4□□□□□ -1.22
PDE6A-205ENST00000617647 CELF1Q92879 486 aaKnown RBP7.4□□□□□ -1.22
PDE6A-205ENST00000617647 CD101Q93033 1021 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 HERPUD2Q9BSE4 406 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 KATNAL1Q9BW62 490 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 C1QTNF1Q9BXJ1 281 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms