RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 OTOP3Q7RTS5 596 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RNF135Q8IUD6 432 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZNF781Q8N8C0 355 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 GPR150Q8NGU9 434 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 LINC01599Q8WXQ3 324 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TRIM8Q9BZR9 551 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PIF1Q9H611 641 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 NMUR1Q9HB89 426 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TMEM161AQ9NX61 479 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TSC22D4Q9Y3Q8 395 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SNX10Q9Y5X0 201 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ARHGAP10A1A4S6 786 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 DDHD2O94830 711 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 HLA-DQB2P05538 268 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ITGB1P05556 798 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CHRNGP07510 517 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 IMPDH2P12268 514 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 UGT1A6P19224 532 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MAPKAPK2P49137 400 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RABGGTBP53611 331 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 YBEYP58557 167 aaPredicted RBP10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RAB10P61026 200 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RPL26P61254 145 aaKnown RBP10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 GRM3Q14832 879 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PIK3R6Q5UE93 754 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZNF554Q86TJ5 538 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PXYLP1Q8TE99 480 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 BTN2A3PQ96KV6 586 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RTKNQ9BST9 563 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 HAUS8Q9BT25 410 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZYG11BQ9C0D3 744 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 IARS2Q9NSE4 1012 aaKnown RBP10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 GMPR2Q9P2T1 348 aaKnown RBP10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 HEATR9A2RTY3 570 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ATP9BO43861 1147 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 GNRH1P01148 92 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 GRIK1P39086 918 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MAP7D1Q3KQU3 841 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PARP15Q460N3 678 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ARHGAP36Q6ZRI8 547 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RPS27LQ71UM5 84 aaKnown RBP10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RNF180Q86T96 592 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SNX29P2Q8IUI4 249 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CENPLQ8N0S6 344 aaPredicted RBP10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PNPLA1Q8N8W4 532 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TSPAN14Q8NG11 270 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 OVCA2Q8WZ82 227 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CDK5RAP1Q96SZ6 601 aaKnown RBP10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TTLL2Q9BWV7 592 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SOX17Q9H6I2 414 aaPredicted RBP10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 COG4Q9H9E3 785 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TRNAU1APQ9NX07 287 aaKnown RBP10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PCDHB5Q9Y5E4 795 aa10.9□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MIA3Q5JRA6 1907 aa10.9□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SMIM31A0A1B0GVY4 71 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 A0A1W2PQH9 124 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 A8MU76 341 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MMP2P08253 660 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SMIM18P0DKX4 95 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ACLYP53396 1101 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 IL10RBQ08334 325 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NSUN2Q08J23 767 aaKnown RBP eCLIP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PRKAA1Q13131 559 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NAPRTQ6XQN6 538 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SETD3Q86TU7 594 aaPredicted RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ATP6V0D2Q8N8Y2 350 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GAB3Q8WWW8 586 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RNF34Q969K3 372 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CCDC126Q96EE4 140 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PRICKLE1Q96MT3 831 aaPredicted RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MRPL57Q9BQC6 102 aaKnown RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TMEM175Q9BSA9 504 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ACE2Q9BYF1 805 aaPredicted RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ILKAPQ9H0C8 392 aaPredicted RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 POPDC3Q9HBV1 291 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 EBF1Q9UH73 591 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TMA7Q9Y2S6 64 aaKnown RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SLC7A4O43246 635 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TSPAN8P19075 237 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CCND3P30281 292 aaPredicted RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CA8P35219 290 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MS4A2Q01362 244 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MS4A13Q5J8X5 152 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PERM1Q5SV97 790 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GPR107Q5VW38 600 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CTU1Q7Z7A3 348 aaKnown RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MAPK15Q8TD08 544 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CYGBQ8WWM9 190 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 JADE3Q92613 823 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 OMDQ99983 421 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SLC39A3Q9BRY0 314 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.89□□□□□ -0.678e-7■■□□□ 13.6
SENP3-EIF4A1-201ENST00000614237 PTTG2Q9NZH5 202 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 UBP1Q9NZI7 540 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 HACD3Q9P035 362 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SFMBT1Q9UHJ3 866 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ANKRD36A6QL64 1941 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MICAL3Q7RTP6 2002 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 AKAP10O43572 662 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms