RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CPNE1Q99829 537 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 TCF7L1Q9HCS4 588 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 RPS6KA6Q9UK32 745 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 ADAM28Q9UKQ2 775 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 TULP4Q9NRJ4 1543 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 PGK1P00558 417 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 CTNNB1P35222 781 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 PTPN9P43378 593 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 SNAPC1Q16533 368 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 PDXDC2PQ6P474 469 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 PDZD9Q8IXQ8 264 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 CLIP4Q8N3C7 705 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 PIGKQ92643 395 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 RIT1Q92963 219 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 TEKT5Q96M29 485 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 TMEM138Q9NPI0 162 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 POLG2Q9UHN1 485 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 PADI2Q9Y2J8 665 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 RIMBP2O15034 1052 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 MSH4O15457 936 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 TULP3O75386 442 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 PLATP00750 562 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 FCER1AP12319 257 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 HTR2AP28223 471 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 CDH6P55285 790 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF746Q6NUN9 644 aaPredicted RBP4.96□□□□□ -1.61
VPS13D-213ENST00000613099 LINC00523Q86TU6 105 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 UBQLNLQ8IYU4 475 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 LARGE2Q8N3Y3 721 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 CAMKK2Q96RR4 588 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 UNC93B1Q9H1C4 597 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 ACEP12821 1306 aa4.96□□□□□ -1.61
VPS13D-213ENST00000613099 RGS19P49795 217 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 STILQ15468 1287 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 TXNRD1Q16881 649 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 AGAP6Q5VW22 663 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 SSX6Q7RTT6 188 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 FAM160B2Q86V87 743 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 DPP10Q8N608 796 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 OXER1Q8TDS5 423 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 GAL3ST3Q96A11 431 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 TXNDC15Q96J42 360 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 AGAP4Q96P64 663 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 DCSTAMPQ9H295 470 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 NUP98P52948 1817 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 C5orf58C9J3I9 102 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 NFICP08651 508 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 SLC5A2P31639 672 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 ANXA11P50995 505 aaKnown RBP4.96□□□□□ -1.62
VPS13D-213ENST00000613099 BTG3Q14201 252 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-213ENST00000613099 C1orf94Q6P1W5 598 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 UTS2BQ765I0 119 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 PRELID2Q8N945 189 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 SLAIN1Q8ND83 568 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 RDH11Q8TC12 318 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 ERVMER34-1Q9H9K5 563 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 LY9Q9HBG7 655 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 TAS2R3Q9NYW6 316 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 ADAM10O14672 748 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 ADAM12O43184 909 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 HOXA2O43364 376 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 VAMP1P23763 118 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 CRHR1P34998 444 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 SPDYE7PQ495Y7 208 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 TFDP3Q5H9I0 405 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 OGFRL1Q5TC84 451 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-213ENST00000613099 VASH1Q7L8A9 365 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-213ENST00000613099 TSPAN33Q86UF1 283 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 UNC5BQ8IZJ1 945 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 GAD1Q99259 594 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 ADAM33Q9BZ11 813 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 FAM83DQ9H4H8 585 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 NIPAL2Q9H841 368 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 SAGE1Q9NXZ1 904 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 DPP3Q9NY33 737 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 MBD5Q9P267 1494 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 KLRF2D3W0D1 207 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 KLF11O14901 512 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 TLL1O43897 1013 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 MED24O75448 989 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 NELFEP18615 380 aaKnown RBP4.96□□□□□ -1.62
VPS13D-213ENST00000613099 HKDC1Q2TB90 917 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 VSTM1Q6UX27 236 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 USP49Q70CQ1 688 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 SCML4Q8N228 414 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 PLBD2Q8NHP8 589 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 CCDC120Q96HB5 630 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 EIF2AK1Q9BQI3 630 aaKnown RBP4.96□□□□□ -1.62
VPS13D-213ENST00000613099 ADPGKQ9BRR6 497 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 UBQLN1Q9UMX0 589 aaKnown RBP4.96□□□□□ -1.62
VPS13D-213ENST00000613099 PNPLA6Q8IY17 1366 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 IRS2Q9Y4H2 1338 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 MAST2Q6P0Q8 1798 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 UBA6A0AVT1 1052 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-213ENST00000613099 C2orf71A6NGG8 1288 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 PSMD9O00233 223 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 AP3D1O14617 1153 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 AP1G1O43747 822 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 GSTM5P46439 218 aa4.96□□□□□ -1.62
VPS13D-213ENST00000613099 VAMP7P51809 220 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms