RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 LRRC66Q68CR7 880 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 TTC30BQ8N4P2 665 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 XAB2Q9HCS7 855 aaKnown RBP12.08□□□□□ -0.48
CLK4-215ENST00000611733 SLC2A6Q9UGQ3 507 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 ZNF711Q9Y462 761 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 ZDBF2Q9HCK1 2354 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 C1orf232A0A0U1RR37 186 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 A0A1W2PQ67 120 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 SDR42E2A6NKP2 422 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 LAMTOR5O43504 91 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 PAPSS2O95340 614 aaPredicted RBP12.08□□□□□ -0.48
CLK4-215ENST00000611733 GM2AP17900 193 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 VIPR1P32241 457 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 ELK3P41970 407 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 NPY2RP49146 381 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 FNTBP49356 437 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 LIG3P49916 1009 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 ARL4CP56559 192 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 TUBB4BP68371 445 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 CAV1Q03135 178 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 CUL1Q13616 776 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 CNGA3Q16281 694 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 HIF1AQ16665 826 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 MAP7D1Q3KQU3 841 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 TTC31Q49AM3 519 aaPredicted RBP12.08□□□□□ -0.48
CLK4-215ENST00000611733 SEL1L3Q68CR1 1132 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 LIPIQ6XZB0 460 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 USP30Q70CQ3 517 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 USP45Q70EL2 814 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 DPPA4Q7L190 304 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 HSD11B1LQ7Z5J1 315 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 DEFB119Q8N690 84 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 GPR161Q8N6U8 529 aaKnown RBP12.08□□□□□ -0.48
CLK4-215ENST00000611733 MYRIPQ8NFW9 859 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 BRSK1Q8TDC3 778 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 KLK6Q92876 244 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 LYSMD1Q96S90 227 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 IER2Q9BTL4 223 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 PLAC1Q9HBJ0 212 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 SAYSD1Q9NPB0 183 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 PRMT8Q9NR22 394 aaPredicted RBP12.08□□□□□ -0.48
CLK4-215ENST00000611733 BFARQ9NZS9 450 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 SCML1Q9UN30 329 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 ZFR2Q9UPR6 939 aaKnown RBP12.08□□□□□ -0.48
CLK4-215ENST00000611733 NCKAP1Q9Y2A7 1128 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 NUMA1Q14980 2115 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 NEMP1O14524 444 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 PLRG1O43660 514 aaKnown RBP12.07□□□□□ -0.48
CLK4-215ENST00000611733 PCDH8O95206 1070 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 SLC34A2O95436 690 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 C1SP09871 688 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 NMBRP28336 390 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 TMPRSS15P98073 1019 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 SMAD1Q15797 465 aaKnown RBP12.07□□□□□ -0.48
CLK4-215ENST00000611733 TMEM52BQ4KMG9 183 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 ERAP2Q6P179 960 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 GLT6D1Q7Z4J2 308 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 TMC3Q7Z5M5 1100 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 PDIK1LQ8N165 341 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 CBARPQ8N350 705 aaPredicted RBP12.07□□□□□ -0.48
CLK4-215ENST00000611733 OR13C4Q8NGS5 318 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 TOE1Q96GM8 510 aaKnown RBP12.07□□□□□ -0.48
CLK4-215ENST00000611733 FCRL3Q96P31 734 aaPredicted RBP12.07□□□□□ -0.48
CLK4-215ENST00000611733 GPR63Q9BZJ6 419 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 ZFYVE1Q9HBF4 777 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLK4-215ENST00000611733 MBD1Q9UIS9 605 aaPredicted RBP12.07□□□□□ -0.48
CLK4-215ENST00000611733 CHMP2BQ9UQN3 213 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 MAD1L1Q9Y6D9 718 aa12.07□□□□□ -0.48
CLK4-215ENST00000611733 TBC1D3DA0A087WVF3 549 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 TBC1D3IA0A087WXS9 549 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 TBC1D3EA0A087X179 549 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 TBC1D3KA0A087X1G2 549 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 IGHV1OR15-9A0A0B4J2B8 117 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 TBC1D3FA6NER0 549 aaPredicted RBP12.06□□□□□ -0.48
CLK4-215ENST00000611733 IGLON5A6NGN9 336 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 TBC1D3LB9A6J9 549 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 E7ESA3 106 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 SMAPO00193 183 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 AXIN1O15169 862 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 CTIFO43310 598 aaKnown RBP12.06□□□□□ -0.48
CLK4-215ENST00000611733 PPFIA2O75334 1257 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 TBC1D3HP0C7X1 549 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 PPP2CBP62714 309 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 PPP2CAP67775 309 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 SRSF5Q13243 272 aaKnown RBP12.06□□□□□ -0.48
CLK4-215ENST00000611733 TBC1D3GQ6DHY5 549 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 TBC1D3CQ6IPX1 549 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 ESRP1Q6NXG1 681 aaKnown RBP12.06□□□□□ -0.48
CLK4-215ENST00000611733 CASC4Q6P4E1 433 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 KBTBD6Q86V97 674 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 ZBED8Q8IZ13 594 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 TBC1D3Q8IZP1 549 aaPredicted RBP12.06□□□□□ -0.48
CLK4-215ENST00000611733 NDUFAF2Q8N183 169 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 PNPLA1Q8N8W4 532 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 RAB7BQ96AH8 199 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 MFSD3Q96ES6 412 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 C9orf72Q96LT7 481 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 FMO2Q99518 471 aa12.06□□□□□ -0.48
CLK4-215ENST00000611733 BTBD1Q9H0C5 482 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms