RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SMPD3Q9NY59 655 aaPredicted RBP22.43■■□□□ 1.18
SHANK2-220ENST00000608988 FADS3Q9Y5Q0 445 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 A0A0J9YYE9 177 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 SMIM28A0A1B0GU29 152 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 H0YAE9 185 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 ANGPT2O15123 496 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 USP2O75604 605 aaPredicted RBP22.43■■□□□ 1.18
SHANK2-220ENST00000608988 BEST1O76090 585 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 CPNE6O95741 557 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 FGF4P08620 206 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 GNAO1P09471 354 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 MRPL19P49406 292 aaKnown RBP22.43■■□□□ 1.18
SHANK2-220ENST00000608988 PMS2P3Q13401 168 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 TUBA3CQ13748 450 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 VGLL4Q14135 290 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 GRIK4Q16099 956 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 ZNF618Q5T7W0 954 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 RETREG3Q86VR2 466 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 SLC15A3Q8IY34 581 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 TBC1D21Q8IYX1 336 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 DCUN1D5Q9BTE7 237 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 MED10Q9BTT4 135 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 TRIM54Q9BYV2 358 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 PAIP1Q9H074 479 aaKnown RBP22.43■■□□□ 1.18
SHANK2-220ENST00000608988 WDCPQ9H6R7 721 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 CYP4F12Q9HCS2 524 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 INTS10Q9NVR2 710 aaKnown RBP22.43■■□□□ 1.18
SHANK2-220ENST00000608988 MAP10Q9P2G4 905 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 AURKCQ9UQB9 309 aa22.43■■□□□ 1.18
SHANK2-220ENST00000608988 TYW5A2RUC4 315 aaKnown RBP22.42■■□□□ 1.18
SHANK2-220ENST00000608988 TTC36A6NLP5 189 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 ACOX3O15254 700 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 VPS4BO75351 444 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 GFAPP14136 432 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 KCNA5P22460 613 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 RAB41Q5JT25 222 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 ZNF678Q5SXM1 525 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 CCNYL2Q5T2Q4 361 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 USP51Q70EK9 711 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 IPMKQ8NFU5 416 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 CHPT1Q8WUD6 406 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 C16orf70Q9BSU1 422 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 SEZ6LQ9BYH1 1024 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 POLR1BQ9H9Y6 1135 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 SLC38A7Q9NVC3 462 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 GJD2Q9UKL4 321 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 ZNF711Q9Y462 761 aa22.42■■□□□ 1.18
SHANK2-220ENST00000608988 CCDC78A2IDD5 438 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 LRIG2O94898 1065 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 NCAM1P13591 858 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 IREB2P48200 963 aaKnown RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 CYHR1Q6ZMK1 362 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 DCDC5Q6ZRR9 648 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 PTRH1Q86Y79 214 aaKnown RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 CMTR2Q8IYT2 770 aaKnown RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 ATPAF2Q8N5M1 289 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 OR9I1Q8NGQ6 314 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 C1orf50Q9BV19 199 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 SEPT3Q9UH03 358 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 ZNF639Q9UID6 485 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 COQ6Q9Y2Z9 468 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 GJA3Q9Y6H8 435 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 A0A0G2JLL6 359 aaPredicted RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 RBM47A0AV96 593 aaKnown RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 YJEFN3A6XGL0 299 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 CLDN5O00501 218 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 MATN3O15232 486 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 WISP3O95389 354 aaPredicted RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 RFC2P35250 354 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 RELAQ04206 551 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 KIF19Q2TAC6 998 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 UGT3A2Q3SY77 523 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 AASDHQ4L235 1098 aaPredicted RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 AARS2Q5JTZ9 985 aaKnown RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 MARCH8Q5T0T0 291 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 GPR107Q5VW38 600 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 FAM117BQ6P1L5 589 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 PRRT2Q7Z6L0 340 aaPredicted RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 SPPL2CQ8IUH8 684 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 SPATA22Q8NHS9 363 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 OSCP1Q8WVF1 389 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 TRUB1Q8WWH5 349 aaKnown RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 CYGBQ8WWM9 190 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 HDAC10Q969S8 669 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 VTA1Q9NP79 307 aa22.41■■□□□ 1.18
SHANK2-220ENST00000608988 TDRKHQ9Y2W6 561 aaKnown RBP22.41■■□□□ 1.18
SHANK2-220ENST00000608988 NR5A2O00482 541 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 ARPC2O15144 300 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 PAPSS2O95340 614 aaPredicted RBP22.4■■□□□ 1.18
SHANK2-220ENST00000608988 ALDOCP09972 364 aaKnown RBP22.4■■□□□ 1.18
SHANK2-220ENST00000608988 OCM2P0CE71 109 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 OCMP0CE72 109 aaPredicted RBP22.4■■□□□ 1.18
SHANK2-220ENST00000608988 HOXB8P17481 243 aaPredicted RBP22.4■■□□□ 1.18
SHANK2-220ENST00000608988 YWHAQP27348 245 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 MAP3K7CLP57077 242 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 KCNC4Q03721 635 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 GRIK2Q13002 908 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 TIGD7Q6NT04 549 aaPredicted RBP22.4■■□□□ 1.18
SHANK2-220ENST00000608988 KCTD8Q6ZWB6 473 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 OLFM1Q99784 485 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms