RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 CALR3Q96L12 384 aaKnown RBP28.23■■■□□ 2.11
ZNF558-206ENST00000599938 MCCC1Q96RQ3 725 aaPredicted RBP28.23■■■□□ 2.11
ZNF558-206ENST00000599938 IL12RB2Q99665 862 aa28.23■■■□□ 2.11
ZNF558-206ENST00000599938 TDRD1Q9BXT4 1180 aaKnown RBP28.23■■■□□ 2.11
ZNF558-206ENST00000599938 SEPT10Q9P0V9 454 aa28.23■■■□□ 2.11
ZNF558-206ENST00000599938 APOBEC3BQ9UH17 382 aaKnown RBP28.23■■■□□ 2.11
ZNF558-206ENST00000599938 MSRB2Q9Y3D2 182 aa28.23■■■□□ 2.11
ZNF558-206ENST00000599938 PCDHGA1Q9Y5H4 931 aa28.23■■■□□ 2.11
ZNF558-206ENST00000599938 DUSP10Q9Y6W6 482 aa28.23■■■□□ 2.11
ZNF558-206ENST00000599938 GOLGA6L6A8MZA4 724 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 FZD6O60353 706 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 CST8O60676 142 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 RFPL3O75679 317 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 ZRANB2O95218 330 aaKnown RBP eCLIP28.22■■■□□ 2.11
ZNF558-206ENST00000599938 PDHA1P08559 390 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 LHCGRP22888 699 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 HTR1BP28222 390 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 EPHB1P54762 984 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 NIPAL4Q0D2K0 466 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 ARHGEF7Q14155 803 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 NFATC4Q14934 902 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 PROX2Q3B8N5 592 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 NDUFAF2Q8N183 169 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 PLA2G15Q8NCC3 412 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 BTN2A2Q8WVV5 523 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 NUS1Q96E22 293 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 SCRN2Q96FV2 425 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 RBM41Q96IZ5 413 aaKnown RBP28.22■■■□□ 2.11
ZNF558-206ENST00000599938 APOOQ9BUR5 198 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 CEP41Q9BYV8 373 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 LACRTQ9GZZ8 138 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 NLGN3Q9NZ94 848 aa28.22■■■□□ 2.11
ZNF558-206ENST00000599938 PTPRBP23467 1997 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 BTNL10A8MVZ5 291 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 SCAMP1O15126 338 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 AQP9O43315 295 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 ALPIP09923 528 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 CKMT2P17540 419 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 IHHQ14623 411 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 TFDP3Q5H9I0 405 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 DHRS13Q6UX07 377 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 UNQ6494/PRO21346Q6UXR6 183 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 BZW1Q7L1Q6 419 aaKnown RBP28.21■■■□□ 2.11
ZNF558-206ENST00000599938 TSPAN33Q86UF1 283 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 RCOR2Q8IZ40 523 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 LMX1AQ8TE12 382 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 COQ10AQ96MF6 247 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 SLC13A1Q9BZW2 595 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 BRD8Q9H0E9 1235 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 TCEAL2Q9H3H9 227 aaPredicted RBP28.21■■■□□ 2.11
ZNF558-206ENST00000599938 SPASTQ9UBP0 616 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 PNMA8BQ9ULN7 279 aaPredicted RBP28.21■■■□□ 2.11
ZNF558-206ENST00000599938 CHKBQ9Y259 395 aa28.21■■■□□ 2.11
ZNF558-206ENST00000599938 hCG_1818297A0A087WSY0 165 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 GIMD1P0DJR0 217 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 PECAM1P16284 738 aaPredicted RBP28.2■■■□□ 2.1
ZNF558-206ENST00000599938 TGM2P21980 687 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 CD86P42081 329 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 NR2C2P49116 596 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 DAB2P98082 770 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 PPARDQ03181 441 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 PTPRRQ15256 657 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 PRRT3Q5FWE3 981 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 FAXCQ5TGI0 409 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 ESRP1Q6NXG1 681 aaKnown RBP28.2■■■□□ 2.1
ZNF558-206ENST00000599938 CNTD1Q8N815 330 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 ATL2Q8NHH9 583 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 EXD1Q8NHP7 514 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 DUSP23Q9BVJ7 150 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 SAE1Q9UBE0 346 aaPredicted RBP28.2■■■□□ 2.1
ZNF558-206ENST00000599938 PPIL1Q9Y3C6 166 aa28.2■■■□□ 2.1
ZNF558-206ENST00000599938 A0A0J9YYE9 177 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 C1QTNF9BB2RNN3 333 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 K7ESM1 405 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 PSMD11O00231 422 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 PJA2O43164 708 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 TRBC1P01850 177 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 C1QTNF9P0C862 333 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 CTNNA1P35221 906 aaKnown RBP28.19■■■□□ 2.1
ZNF558-206ENST00000599938 ENPP7Q6UWV6 458 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 B4GALNT4Q76KP1 1039 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 HSD11B1LQ7Z5J1 315 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 GATA6Q92908 595 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 DTD2Q96FN9 168 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 WDR92Q96MX6 357 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 AGAP3Q96P47 875 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 DESI2Q9BSY9 194 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 LRRC61Q9BV99 259 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 WDR26Q9H7D7 661 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 PCDH9Q9HC56 1237 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 KLQ9UEF7 1012 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 CSNK1G3Q9Y6M4 447 aa28.19■■■□□ 2.1
ZNF558-206ENST00000599938 LRP4O75096 1905 aa28.18■■■□□ 2.1
ZNF558-206ENST00000599938 USP24Q9UPU5 2620 aa28.18■■■□□ 2.1
ZNF558-206ENST00000599938 FAM221BA6H8Z2 402 aa28.18■■■□□ 2.1
ZNF558-206ENST00000599938 CACNB4O00305 520 aaPredicted RBP28.18■■■□□ 2.1
ZNF558-206ENST00000599938 C1SP09871 688 aa28.18■■■□□ 2.1
ZNF558-206ENST00000599938 HNF1BP35680 557 aa28.18■■■□□ 2.1
ZNF558-206ENST00000599938 ETV3P41162 512 aa28.18■■■□□ 2.1
ZNF558-206ENST00000599938 BLKP51451 505 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms