RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 HK3P52790 923 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 EPHB1P54762 984 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 SRP54P61011 504 aaKnown RBP14.37□□□□□ -0.11
IRF3-224ENST00000599680 CYP4F3Q08477 520 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 TRAF2Q12933 501 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 TARDBPQ13148 414 aaKnown RBP eCLIP14.37□□□□□ -0.112e-6■■■■□ 22.3
IRF3-224ENST00000599680 TBX2Q13207 712 aaPredicted RBP14.37□□□□□ -0.11
IRF3-224ENST00000599680 ESRP1Q6NXG1 681 aaKnown RBP14.37□□□□□ -0.11
IRF3-224ENST00000599680 TEX26Q8N6G2 289 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 PLA2G15Q8NCC3 412 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 IFI44Q8TCB0 444 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 FAF2Q96CS3 445 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 NUS1Q96E22 293 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 NSMCE3Q96MG7 304 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 TSGA13Q96PP4 275 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 RNF157Q96PX1 679 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 RBM22Q9NW64 420 aaKnown RBP eCLIP14.37□□□□□ -0.11
IRF3-224ENST00000599680 DDX56Q9NY93 547 aaKnown RBP14.37□□□□□ -0.11
IRF3-224ENST00000599680 AMACRQ9UHK6 382 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 MOSPD1Q9UJG1 213 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 SALL4Q9UJQ4 1053 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 HEY1Q9Y5J3 304 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 RAI2Q9Y5P3 530 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 SPEGQ15772 3267 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 ADAMTS20P59510 1910 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 DMXL2Q8TDJ6 3036 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 PKD1L2Q7Z442 2459 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 ZZEF1O43149 2961 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 ASXL3Q9C0F0 2248 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 GOLGA6CA6NDK9 693 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 GOLGA6BA6NDN3 693 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 LMO7DNF2Z398 122 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 GCATO75600 419 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 PGLSO95336 258 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 TNFP01375 233 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 GP1BAP07359 652 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 GOLGA6DP0CG33 693 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 TSHRP16473 764 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 CTPS1P17812 591 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 SLC1A1P43005 524 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 NOP2P46087 812 aaKnown RBP14.36□□□□□ -0.11
IRF3-224ENST00000599680 KIAA1024LP59773 190 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 INSM1Q01101 510 aaPredicted RBP14.36□□□□□ -0.11
IRF3-224ENST00000599680 GBE1Q04446 702 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 CAMK2BQ13554 666 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 NR0B2Q15466 257 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 TCEA2Q15560 299 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 CNGA3Q16281 694 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 CDKN3Q16667 212 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 ALG11Q2TAA5 492 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 GKN2Q86XP6 184 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 RFX6Q8HWS3 928 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 RHOT1Q8IXI2 618 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 CCDC13Q8IYE1 715 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 PQLC3Q8N755 202 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 MAPK15Q8TD08 544 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 SPOCK2Q92563 424 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 RAPGEF5Q92565 580 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 MAML1Q92585 1016 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 WDR26Q9H7D7 661 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 GOLGA6AQ9NYA3 693 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 AK5Q9Y6K8 562 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 CHD6Q8TD26 2715 aa14.36□□□□□ -0.11
IRF3-224ENST00000599680 ARHGEF17Q96PE2 2063 aaPredicted RBP14.35□□□□□ -0.11
IRF3-224ENST00000599680 ZNF487B1APH4 448 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 PDE2AO00408 941 aaPredicted RBP14.35□□□□□ -0.11
IRF3-224ENST00000599680 APOL1O14791 398 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 OPA1O60313 960 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 HEXIM1O94992 359 aaKnown RBP14.35□□□□□ -0.11
IRF3-224ENST00000599680 MT-CO3P00414 261 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 ZFXP17010 805 aaPredicted RBP14.35□□□□□ -0.11
IRF3-224ENST00000599680 CYLC1P35663 651 aaPredicted RBP14.35□□□□□ -0.11
IRF3-224ENST00000599680 MAGEA1P43355 309 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 DSC2Q02487 901 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 SPA17Q15506 151 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 C6orf132Q5T0Z8 1188 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 LRRC38Q5VT99 294 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 EFL1Q7Z2Z2 1120 aaKnown RBP14.35□□□□□ -0.11
IRF3-224ENST00000599680 SDR16C5Q8N3Y7 309 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 TC2NQ8N9U0 490 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 OR56A4Q8NGH8 313 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 TPCN2Q8NHX9 752 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 FATE1Q969F0 183 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 FUBP1Q96AE4 644 aaKnown RBP14.35□□□□□ -0.11
IRF3-224ENST00000599680 HDAC11Q96DB2 347 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 SCRN2Q96FV2 425 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 COQ10AQ96MF6 247 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 DEPDC7Q96QD5 511 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 PHPT1Q9NRX4 125 aaPredicted RBP14.35□□□□□ -0.11
IRF3-224ENST00000599680 DTLQ9NZJ0 730 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 GULP1Q9UBP9 304 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 DKK4Q9UBT3 224 aa14.35□□□□□ -0.11
IRF3-224ENST00000599680 PNMA8BQ9ULN7 279 aaPredicted RBP14.35□□□□□ -0.11
IRF3-224ENST00000599680 LY6G6EA0A0G2JKS1 128 aa14.34□□□□□ -0.11
IRF3-224ENST00000599680 NPIPB15A6NHN6 443 aaPredicted RBP14.34□□□□□ -0.11
IRF3-224ENST00000599680 PSMD11O00231 422 aa14.34□□□□□ -0.11
IRF3-224ENST00000599680 PPP1R12AO14974 1030 aaPredicted RBP14.34□□□□□ -0.11
IRF3-224ENST00000599680 YY2O15391 372 aa14.34□□□□□ -0.11
IRF3-224ENST00000599680 IPO7O95373 1038 aaKnown RBP14.34□□□□□ -0.11
IRF3-224ENST00000599680 ETV3P41162 512 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms