RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RAD51BO15315 384 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 GDF9O60383 454 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 MAGEC1O60732 1142 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 WNT1P04628 370 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 HNF1BP35680 557 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 GEMP55040 296 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 CLDN2P57739 230 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 CDK18Q07002 472 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 GALNT3Q14435 633 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 PRPSAP1Q14558 356 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 ACOX1Q15067 660 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 CNGA3Q16281 694 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 DENND2CQ68D51 928 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 IL27RAQ6UWB1 636 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 ARHGEF18Q6ZSZ5 1173 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 IQCHQ86VS3 1027 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 TADA1Q96BN2 335 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 KLHDC7BQ96G42 594 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 LENG8Q96PV6 779 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 OSBPL9Q96SU4 736 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 MLPHQ9BV36 600 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 TMEM9BQ9NQ34 198 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 ZNF148Q9UQR1 794 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 ZKSCAN5Q9Y2L8 839 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 HS3ST3A1Q9Y663 406 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 ASCC3Q8N3C0 2202 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 C5orf60A6NFR6 353 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 CAPN8A6NHC0 703 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 A6NNZ2 444 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 ANKRD66B4E2M5 251 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 ANXA9O76027 345 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 HEXIM1O94992 359 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 NDST3O95803 873 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 CER1O95813 267 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 PSMB4P28070 264 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 WNT3AP56704 352 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 BNC1Q01954 994 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 OVGP1Q12889 678 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 MPP3Q13368 585 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 PTPRRQ15256 657 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 SIX1Q15475 284 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 CCNG2Q16589 344 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 QPCTQ16769 361 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 KIF19Q2TAC6 998 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 KDELC1Q6UW63 502 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 GCNT7Q6ZNI0 430 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 PTAR1Q7Z6K3 402 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 TSPAN33Q86UF1 283 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 MINDY1Q8N5J2 469 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 IPMKQ8NFU5 416 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 FAM174AQ8TBP5 190 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 OXNAD1Q96HP4 312 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 SMIM14Q96QK8 99 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 TRIB3Q96RU7 358 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 KLF6Q99612 283 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 RTKNQ9BST9 563 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 SNX11Q9Y5W9 270 aa19.71■□□□□ 0.75
SHKBP1-214ENST00000597396 CABIN1Q9Y6J0 2220 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 DCDC2BA2VCK2 349 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 GOLGA8CPA6NN73 597 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 H0Y8X5 98 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 TLR4O00206 839 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 RECQL5O94762 991 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 THEGLP0DJG4 465 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 LHCGRP22888 699 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 STIP1P31948 543 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 GDF10P55107 478 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 LRRC14Q15048 493 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 OASLQ15646 514 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 KYAT3Q6YP21 454 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 RASGEF1CQ8N431 466 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 TP53I13Q8NBR0 393 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 NETO1Q8TDF5 533 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 PPP1R2P1Q96PQ5 205 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 NAP1L3Q99457 506 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 FSD1LQ9BXM9 530 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 GDF3Q9NR23 364 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 SNX12Q9UMY4 172 aa19.7■□□□□ 0.74
SHKBP1-214ENST00000597396 GOLGA6CA6NDK9 693 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 GOLGA6BA6NDN3 693 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 POM121BA6NF01 834 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 PSMD11O00231 422 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 PGRMC1O00264 195 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 GCATO75600 419 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 IFNB1P01574 187 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 GOLGA6DP0CG33 693 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 ZNF30P17039 623 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 ACTN2P35609 894 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 IGFALSP35858 605 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 CTSKP43235 329 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 AGERQ15109 404 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 IRF4Q15306 451 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 STPG1Q5TH74 334 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 LRRC66Q68CR7 880 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 CRTC1Q6UUV9 634 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 ABI3BPQ7Z7G0 1075 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 C17orf53Q8N3J3 647 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 OR13H1Q8NG92 308 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 OR2I1PQ8NGU4 316 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 CENPTQ96BT3 561 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms