RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 JADE3Q92613 823 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 CHD5Q8TDI0 1954 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 ACSL4O60488 711 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 MT-CO1P00395 513 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 FGF1P05230 155 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 HLA-DPA1P20036 260 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 GNA12Q03113 381 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 CLEC6AQ6EIG7 209 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 C16orf89Q6UX73 402 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 DENND1CQ8IV53 801 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 ZNF512Q96ME7 567 aaPredicted RBP22.74■■□□□ 1.23
SRRM1-222ENST00000596378 GSTO2Q9H4Y5 243 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 SCN5AQ14524 2016 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 SERPINF2P08697 491 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 MRPS35P82673 323 aaKnown RBP22.74■■□□□ 1.23
SRRM1-222ENST00000596378 ACVR1Q04771 509 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 ARMC3Q5W041 872 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 BNC2Q6ZN30 1099 aaPredicted RBP22.74■■□□□ 1.23
SRRM1-222ENST00000596378 PELI3Q8N2H9 469 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 FBXO22Q8NEZ5 403 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 CEP70Q8NHQ1 597 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 PRICKLE1Q96MT3 831 aaPredicted RBP22.74■■□□□ 1.23
SRRM1-222ENST00000596378 DNMT3LQ9UJW3 386 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 CORO1CQ9ULV4 474 aaPredicted RBP22.74■■□□□ 1.23
SRRM1-222ENST00000596378 SPO11Q9Y5K1 396 aa22.74■■□□□ 1.23
SRRM1-222ENST00000596378 H3BNX3 289 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 FDXRP22570 491 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 PAX7P23759 505 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 ATXN3P54252 364 aaPredicted RBP22.73■■□□□ 1.23
SRRM1-222ENST00000596378 CAPRIN2Q6IMN6 1127 aaKnown RBP22.73■■□□□ 1.23
SRRM1-222ENST00000596378 FAM45BPQ6NSW5 357 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 ANKS3Q6ZW76 656 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 ADGRG6Q86SQ4 1221 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 FAM45AQ8TCE6 357 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 SPDL1Q96EA4 605 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 CCDC126Q96EE4 140 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 LAMA2P24043 3122 aaKnown RBP22.73■■□□□ 1.23
SRRM1-222ENST00000596378 CCDC189A1A4V9 331 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 TCAF2A6NFQ2 919 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 SLC22A2O15244 555 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 RPP40O75818 363 aaKnown RBP22.73■■□□□ 1.23
SRRM1-222ENST00000596378 SUPT7LO94864 414 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 XRCC1P18887 633 aaPredicted RBP22.73■■□□□ 1.23
SRRM1-222ENST00000596378 PEX2P28328 305 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 ATP5C1P36542 298 aaKnown RBP22.73■■□□□ 1.23
SRRM1-222ENST00000596378 KBTBD6Q86V97 674 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 NPAS4Q8IUM7 802 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 HMGCLL1Q8TB92 370 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 BRSK1Q8TDC3 778 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 TMA16Q96EY4 203 aaKnown RBP22.73■■□□□ 1.23
SRRM1-222ENST00000596378 SCLYQ96I15 445 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 TRIB3Q96RU7 358 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 WDR41Q9HAD4 459 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 GKN1Q9NS71 199 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 STK39Q9UEW8 545 aa22.73■■□□□ 1.23
SRRM1-222ENST00000596378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.72■■□□□ 1.23
SRRM1-222ENST00000596378 H3BNC9 293 aa22.72■■□□□ 1.23
SRRM1-222ENST00000596378 H7C4K7 107 aa22.72■■□□□ 1.23
SRRM1-222ENST00000596378 HOXD10P28358 340 aa22.72■■□□□ 1.23
SRRM1-222ENST00000596378 SCNN1BP51168 640 aa22.72■■□□□ 1.23
SRRM1-222ENST00000596378 NOGQ13253 232 aa22.72■■□□□ 1.23
SRRM1-222ENST00000596378 CEACAM7Q14002 265 aa22.72■■□□□ 1.23
SRRM1-222ENST00000596378 SETD3Q86TU7 594 aaPredicted RBP22.72■■□□□ 1.23
SRRM1-222ENST00000596378 STON2Q8WXE9 905 aa22.72■■□□□ 1.23
SRRM1-222ENST00000596378 EML4Q9HC35 981 aaKnown RBP22.72■■□□□ 1.23
SRRM1-222ENST00000596378 CATSPERZQ9NTU4 200 aa22.72■■□□□ 1.23
SRRM1-222ENST00000596378 POLR3BQ9NW08 1133 aaPredicted RBP22.72■■□□□ 1.23
SRRM1-222ENST00000596378 DLGAP2Q9P1A6 1054 aa22.72■■□□□ 1.23
SRRM1-222ENST00000596378 PRPF19Q9UMS4 504 aaKnown RBP22.72■■□□□ 1.23
SRRM1-222ENST00000596378 LRRC14BA6NHZ5 514 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 CD1DP15813 335 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 OR1D2P34982 312 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 CDH13P55290 713 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 ZNF423Q2M1K9 1284 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 SFT2D3Q587I9 215 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 OR4L1Q8NH43 312 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 HMX1Q9NP08 348 aaPredicted RBP22.71■■□□□ 1.23
SRRM1-222ENST00000596378 ATP6AP2A0A1C7CYW4 349 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 COCHO43405 550 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 ATP6AP2O75787 350 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 KLKB1P03952 638 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 LINGO3P0C6S8 592 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 UBTFL6P0CB48 400 aaPredicted RBP22.71■■□□□ 1.23
SRRM1-222ENST00000596378 IRF1P10914 325 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 HDCP19113 662 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 IMPDH1P20839 514 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 KPNA1P52294 538 aaPredicted RBP22.71■■□□□ 1.23
SRRM1-222ENST00000596378 ART3Q13508 389 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 HERC3Q15034 1050 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 PIGGQ5H8A4 983 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 ZNF678Q5SXM1 525 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 MRNIPQ6NTE8 343 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 SDCCAG8Q86SQ7 713 aaPredicted RBP22.71■■□□□ 1.23
SRRM1-222ENST00000596378 GDPD5Q8WTR4 605 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 HHIPL1Q96JK4 782 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 MGME1Q9BQP7 344 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 CINPQ9BW66 212 aaPredicted RBP22.71■■□□□ 1.23
SRRM1-222ENST00000596378 TTLL2Q9BWV7 592 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 MEAF6Q9HAF1 191 aa22.71■■□□□ 1.23
SRRM1-222ENST00000596378 H3BMM5 538 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms