RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 KLHDC7AQ5VTJ3 777 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 ZNF783Q6ZMS7 281 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 NLGN4XQ8N0W4 816 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 NLGN4YQ8NFZ3 816 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 OR56A4Q8NGH8 313 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 PATE1Q8WXA2 126 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 STARD8Q92502 1023 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 KIAA1143Q96AT1 154 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 C1orf74Q96LT6 269 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 NPY6RQ99463 290 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 NAA15Q9BXJ9 866 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 ASPSCR1Q9BZE9 553 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 VPS16Q9H269 839 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 SUDS3Q9H7L9 328 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 CYP4F12Q9HCS2 524 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 CASS4Q9NQ75 786 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 PCDHGC3Q9UN70 934 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 KCNMB2Q9Y691 235 aa13.82□□□□□ -0.2
SHKBP1-208ENST00000595726 PDZD2O15018 2839 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 FAM170AA1A519 330 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 INSIG1O15503 277 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 DAB1O75553 588 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 GSRP00390 522 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 PDGFAP04085 211 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 FGF1P05230 155 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 UCHL3P15374 230 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 TCN2P20062 427 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 CSF2RBP32927 897 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 SULT1E1P49888 294 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 RIPPLY3P57055 190 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 SNRPD1P62314 119 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 PTK2Q05397 1052 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 DEUP1Q05D60 604 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 RAPGEF1Q13905 1077 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 EIF2S3LQ2VIR3 472 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 SLC47A2Q86VL8 602 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 FAM71AQ8IYT1 594 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 EFCAB3Q8N7B9 438 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 ARHGEF2Q92974 986 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 HAPLN3Q96S86 360 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 TBCBQ99426 244 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 LGR4Q9BXB1 951 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 OSBPL1AQ9BXW6 950 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 ZYG11BQ9C0D3 744 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 ZFHX3Q15911 3703 aa13.81□□□□□ -0.2
SHKBP1-208ENST00000595726 ARHGEF17Q96PE2 2063 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 MKRN2OSH3BPM6 223 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 ECEL1O95672 775 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 FURINP09958 794 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 F8A1P23610 371 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 MAP4P27816 1152 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 LIG3P49916 1009 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 SLC6A3Q01959 620 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 TCTN3Q6NUS6 607 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 CAVIN1Q6NZI2 390 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 MAMDC2Q7Z304 686 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 KDELC2Q7Z4H8 507 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 ZNF438Q7Z4V0 828 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 C17orf82Q86X59 251 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 NRROSQ86YC3 692 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 TICAM1Q8IUC6 712 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 CCDC13Q8IYE1 715 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 BMPERQ8N8U9 685 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 C1orf131Q8NDD1 294 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 OR4D9Q8NGE8 314 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 ATL2Q8NHH9 583 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 CPT1CQ8TCG5 803 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 ZDHHC1Q8WTX9 485 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 RTP4Q96DX8 246 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 HMCESQ96FZ2 354 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 GANQ9H2C0 597 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 HSD3B7Q9H2F3 369 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 ZNF768Q9H5H4 540 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 PLCB1Q9NQ66 1216 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 DNAI1Q9UI46 699 aa13.8□□□□□ -0.2
SHKBP1-208ENST00000595726 ESPL1Q14674 2120 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 A8MU76 341 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 B4E171 279 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 F8VZ95 297 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 PPM1DO15297 605 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 PIGNO95427 931 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 TPM2P07951 284 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 THRAP10827 490 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 XPAP23025 273 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 ELAVL4P26378 380 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 TSPAN7P41732 249 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 KLK7P49862 253 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 MTM1Q13496 603 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 TRA2AQ13595 282 aaKnown RBP eCLIP13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 SLC26A9Q7LBE3 791 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 TMEM135Q86UB9 458 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 AOPEPQ8N6M6 819 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 KIAA1524Q8TCG1 905 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 MAGEB5Q9BZ81 275 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 APMAPQ9HDC9 416 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 PCDH12Q9NPG4 1184 aa13.79□□□□□ -0.2
SHKBP1-208ENST00000595726 CUEDC1Q9NWM3 386 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms